Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00509 ATGGAGATCATTATGCCAAGTTTGGAGAGAGACTTAAATGACACGAGGGGGTATTATGAGAGTGGAAAGACTAAGGAAGCGTCCTGGAGAGAATCGCAGCTCAAAGGGTTGCGTCGTTTTCTCATTGAAAAACAAGAAGATATCATGAATGCCCTCATGCATGATTTAGGGAAACATCAACTTGAAGCTTTCAGAGACGAGATAGGAACGTTGATTAAGACCTTAAATCTGGCGTTGAAGTCTTTGAAACATTGGATGTCAGGCAAAAAGGCTGCGTTGCCGCAATTAGCATTGCTAACCAGTGCAGAAATTGTTCCGGAGCCACTTGGTGTGGTCCTCATTATTTCATCTTGGAATTTCCCCTTTGGAATATCCTTGGAGCCACTGATAGGAGCAGTAGCTGCGGGAAATGCAGCAGTCTTAAAGCCTTCAGAGTTGTCTCCAGCATGTTCTTCTCTACTTGCTTCTAATCTCTCCACTTATTTGGACAATAAAGCCATTAAGGTCATCCAAGGAGGGCCAAAAGAAACTCAGCAACTTCTAGAGCAAAGATGGGACAAAATATTCTTCACAGGAAGTGCACATGTGGGGAAGATTGTGATGTCTGCTGCTGTGAAGCATCTAACTCCTGTGACTTTGGAGTTGGGTGGAAAATGCCCTGCAGTTGTTGACTCCCTTTCATCTTCTTGGAACATAGAGGTCGCTGTGAAGAGAATTATTGTGGGGAAATATGGGGCATGTGCTGGTCAAGCATGCATAGCAATTGATTATGTCCTTGTGGAAAAGGTTTACTgttttaaactgGTGGAATTGATGAAGGTCTGGATCAAGAAAATGTTTGGAGAGAACCCTCAACAATCCAAAACTATTGCCAAGATAGTTAATAAACACCACTTCTCTAGATTGAAGAATCTTCTTGCTGATAAAAAGGTCAAAGAATCTGTGATTTATGGTGGTTCAATGGACGAACAAAACTTATTTATTGAGCCAACGATCTTGGTGGATCCCCCACTGGAAGCAGCAATTATGTCGGAAGAGATTTTTGGCCCATTACTTCCAATTATTACCGTGGAGAAGATTGAGGACAGTATTAAATTCATAAATTCTAGACCTAAACCTCTTGCCCTTTATGTTTTCACCAAAAACCAAACACTGCAGAGAAGAATGATATCTGAAACATCATCTGGCAGTGTGACTATCAACGACGCAATTCTACAATATGCAGTTGATACTGTTCCATTTGGAGGAGTGGGGGAAAGTGGGTTTGGCATGTACCATGGGAAATTCTCCTTTGACACATTTAGCCACCAGAAAGCAATTGTAAGAAGAAGTTTCCTCACTGATTTTTGGTATAGATATCCTCCATGGACACTAAACAAGTTACAACTACTTGAAGTCTCTTACAATTATGATTATCTGGGATTGCTCCTTGTCCTGTTGGGCTTAAAGAGACCATCAAAACGTTTAATCTCAGATCATGTTTAG 1485 0.4101 MEIIMPSLERDLNDTRGYYESGKTKEASWRESQLKGLRRFLIEKQEDIMNALMHDLGKHQLEAFRDEIGTLIKTLNLALKSLKHWMSGKKAALPQLALLTSAEIVPEPLGVVLIISSWNFPFGISLEPLIGAVAAGNAAVLKPSELSPACSSLLASNLSTYLDNKAIKVIQGGPKETQQLLEQRWDKIFFTGSAHVGKIVMSAAVKHLTPVTLELGGKCPAVVDSLSSSWNIEVAVKRIIVGKYGACAGQACIAIDYVLVEKVYCFKLVELMKVWIKKMFGENPQQSKTIAKIVNKHHFSRLKNLLADKKVKESVIYGGSMDEQNLFIEPTILVDPPLEAAIMSEEIFGPLLPIITVEKIEDSIKFINSRPKPLALYVFTKNQTLQRRMISETSSGSVTINDAILQYAVDTVPFGGVGESGFGMYHGKFSFDTFSHQKAIVRRSFLTDFWYRYPPWTLNKLQLLEVSYNYDYLGLLLVLLGLKRPSKRLISDHV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00509 494 Pfam Aldehyde dehydrogenase family 26 440 IPR015590 GO:0016491
Gma12g00509 494 PANTHER ALDEHYDE DEHYDROGENASE 6 489 IPR012394 GO:0006081
Gma12g00509 494 PIRSF ALDH 3 476 IPR012394 GO:0006081
Gma12g00509 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 18 438 IPR016162 GO:0016491
Gma12g00509 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Gma12g00509 494 SUPERFAMILY ALDH-like 16 457 IPR016161 GO:0016491
Gma12g00509 494 PANTHER ALDEHYDE DEHYDROGENASE 6 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00509 Gma-Chr12 4257891 4261086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00509 1 484 Aldehyde Dehydrogenase Gene Family AT4G36250 52.479 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00509 K00128 - gmx:100817701 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00509 12 4257891 4261086 Gma12g00509 12 4257891 4261086 ECH
Gma12g00509 12 4257891 4261086 Gma11g01208 11 10322636 10326027 GST
Gma13g03035 13 44744642 44748335 Gma12g00509 12 4257891 4261086 PCT
Gma15g00325 15 2811581 2815805 Gma12g00509 12 4257891 4261086 PCT
Gma12g00509 12 4257891 4261086 Gma13g03035 13 44744642 44748335 PCT
Gma12g00509 12 4257891 4261086 Gma15g00325 15 2811581 2815805 PCT