Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00463 ATGAATCAGTTATTCATCAATTCCATAGACTGTTGTGTAGAACTGGAATATCACCTGTGCACTGAAAATCTTATACCAGATTCTTTTGTTACCGCAGTGGAGGTTGAGATTGATGGCTCTGTTACTGTCGAAACAGTAGGAAATACTGCTATGGGTGAGGTCAGTAGCATAGCTGATGACAACAGAGAAGGTGGAAGTTCTGTTGAACCAAATGACAAACAAGATCAACATGATAACATGACTCAAGATTCCTCTGGAGGGATCACTATCCCAACTGCAATTCCCACAGTATCAGTTGTTTCAGTTGAAGAGCCCTATGTGGGTCAGGAGTTTGGGTCAGAAGCAGCAGCACATGCATTTTATAATGCTTATGCTACAGATGTTGGATTCATTGTACGTGTGAGTAAACTCTCGCGGTCAAGGCGTGATGGAACTGCTATTGGACGCACTCTTGTTTGCAACAAAGAGGGTTTCAGAATGGCTGACAAACGTGAAAAGATTGTGAGGCAAAGGGCTGAGACCAGGGTTGGTTGCAGGGCAATGATTATGGTGAGGAAACTTAGTTCTGGCAAATGGGTTATTGCAAAGTTTGTAAAGGAACACACACATCCGTTGACTCCTGGCAAAGGTAGAAGGGATTTCTACTATGAACAATATCCGACTGAACAAGATAAAATTCGGGAACTATCTCAGCAGTTGGCAACTGAGAAAAAGCGATCTGCGGCCTATAAAAGGCATCTTGAATTGATATTTGAGCAAATTGAAGAGCAGAACGAGAACCTTTCAAAGAAAATACAGCacatagtagacaAGGCACGAACGAAGGTGCAAGGCCAAGGGGTTGTGCGATGGGTGATGGCTAAGCCAAAGGATCACACAGGTAGTCTAAAGTCGGGAACTATACGCGATGTTGTTTAG 918 0.4281 MNQLFINSIDCCVELEYHLCTENLIPDSFVTAVEVEIDGSVTVETVGNTAMGEVSSIADDNREGGSSVEPNDKQDQHDNMTQDSSGGITIPTAIPTVSVVSVEEPYVGQEFGSEAAAHAFYNAYATDVGFIVRVSKLSRSRRDGTAIGRTLVCNKEGFRMADKREKIVRQRAETRVGCRAMIMVRKLSSGKWVIAKFVKEHTHPLTPGKGRRDFYYEQYPTEQDKIRELSQQLATEKKRSAAYKRHLELIFEQIEEQNENLSKKIQHIVDKARTKVQGQGVVRWVMAKPKDHTGSLKSGTIRDVV 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00463 305 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 31 273 - -
Gma12g00463 305 Pfam FAR1 DNA-binding domain 120 206 IPR004330 -
Gma12g00463 305 Coils Coil 226 271 - -
Gma12g00463 305 MobiDBLite consensus disorder prediction 52 88 - -
Gma12g00463 305 MobiDBLite consensus disorder prediction 65 79 - -
Gma12g00463 305 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 31 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00463 Gma-Chr12 3791019 3792890 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma12g00463 FAR1 6.7e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00463 - - gmx:100777092 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00463 12 3791019 3792890 Gma12g00463 12 3791019 3792890 ECH
Gma12g00463 12 3791019 3792890 Gma11g01164 11 9798396 9801578 GST
Gma13g03077 13 45092669 45093151 Gma12g00463 12 3791019 3792890 PCT
Gma15g00285 15 2460294 2468475 Gma12g00463 12 3791019 3792890 PCT
Gma12g00463 12 3791019 3792890 Gma13g03077 13 45092669 45093151 PCT
Gma12g00463 12 3791019 3792890 Gma15g00285 15 2460294 2468475 PCT