Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00405 ATGGATAAAAGAGTTGCCAAGCATGATGAAAAAAAGTCTGCGCCCAAAAATGAGACACAAAACTTGCCCCAACCCTTGCCATCTCCATGGTCTACTTCTACACAGGTTTATCATAATTTTGGGCCTGCTGCAACTTCCAGTGTAAATTCTGCTAGTTCTCTTTTTCATTCCCCCTGGTTTGGAAGCCAGATATGGCATATGCCAATTCCATATGATTCTGTACATCAAAGGAGGTCATTCTCCAATCTCTATCCTATGGCAACAGCAGGGTTTGGTCAGAGTTCTTTGTTAGTTTCTGTGGATGGATCGATACAAAGGGCATCTACTGAATTAAACAATAATTTAATGGGAAAAGGCCTTCAATCCCAGGAATCCAGGCCTTCAATCCTAAAAACCAATGGGGAAGGACTAACAAGGAGTGCGACTAGCAAAAGCAGGGAAACAACAGTTGTAGGCCATGATGTTAAGAATGCCGGTGGAGCAACAAAATTTAAAATAAAGGATTTGCCTTCAGTTAAGCCGCAGCAATCCAGTATGATGCCATTGCCTGGAAATGGGGGAGGTGTACAGAATGTGATTAGTAATGAAAATTGCAATGCTGTTCATGAGAATAGAAATATTGCATCGGATCATTTTGAAGCAAATCCAACTGAGCTGAATCAGAAATTGACTACAGCTCCCAATGCAACTGGCAATAATCCACATCTTAAAGAAAAGGAGAGTGATGAAACAAAAGAGAAAAGAAAAAGGCAGGAAAATAAGATATCAGCCAAGAGAACAAAGAGGAAGATCATGAAGCTGCAGGATATCCCTTCAACTAGGCAGGGGCATTCCAGTATGATGCATGGAAATGGGGGAGCTTCACAGAATGTGACTAGCAATGAAACTTGCAATGCTGTTCATGAGAATAGAAACATTGCATCAGATCATTTTGAAGCAAATCCAACTGAGCTGCAGAATCAGAAGTTGGGTACAGAACCCAATGCATCTGGCAATAAGCGTCAACTTAGAAAAAAGGAAACTGCTGAAGAAAAAGAACAAAGAAGAAAACAGCAAAAGAAGATAGCATCTAAGAGATCAAGGATGAAGATAAAGATGGAACGTGAAAAGTTAATTGATTCCTTGGAGAGTCTTGATGATGAAAAGGCTGCGCTCAGGGAAGAGCTTCATGACCGTACTATTGAGTGTGAGAAGATCGAAAAAGAAAACAATGCCTTACTGGCAGAACTCATTGAGGAATATGGTGAAGAAACAATAATGAACCTTCTGAATGCACAGTCTACTGACTCAGTTGCTGGTGGTGGTCAAGGCTCAAAAAACAGTTGA 1326 0.4072 MDKRVAKHDEKKSAPKNETQNLPQPLPSPWSTSTQVYHNFGPAATSSVNSASSLFHSPWFGSQIWHMPIPYDSVHQRRSFSNLYPMATAGFGQSSLLVSVDGSIQRASTELNNNLMGKGLQSQESRPSILKTNGEGLTRSATSKSRETTVVGHDVKNAGGATKFKIKDLPSVKPQQSSMMPLPGNGGGVQNVISNENCNAVHENRNIASDHFEANPTELNQKLTTAPNATGNNPHLKEKESDETKEKRKRQENKISAKRTKRKIMKLQDIPSTRQGHSSMMHGNGGASQNVTSNETCNAVHENRNIASDHFEANPTELQNQKLGTEPNASGNKRQLRKKETAEEKEQRRKQQKKIASKRSRMKIKMEREKLIDSLESLDDEKAALREELHDRTIECEKIEKENNALLAELIEEYGEETIMNLLNAQSTDSVAGGGQGSKNS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00405 441 MobiDBLite consensus disorder prediction 223 292 - -
Gma12g00405 441 Coils Coil 361 402 - -
Gma12g00405 441 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 343 406 IPR004827 GO:0003700|GO:0006355
Gma12g00405 441 MobiDBLite consensus disorder prediction 1 16 - -
Gma12g00405 441 MobiDBLite consensus disorder prediction 118 148 - -
Gma12g00405 441 SMART brlzneu 341 405 IPR004827 GO:0003700|GO:0006355
Gma12g00405 441 MobiDBLite consensus disorder prediction 17 34 - -
Gma12g00405 441 PANTHER G-BOX-BINDING FACTOR 1 11 261 - -
Gma12g00405 441 PANTHER G-BOX-BINDING FACTOR 1 268 428 - -
Gma12g00405 441 MobiDBLite consensus disorder prediction 271 292 - -
Gma12g00405 441 MobiDBLite consensus disorder prediction 332 351 - -
Gma12g00405 441 PANTHER G-BOX-BINDING FACTOR 3-RELATED 11 261 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gma12g00405 441 PANTHER G-BOX-BINDING FACTOR 3-RELATED 268 428 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gma12g00405 441 MobiDBLite consensus disorder prediction 318 363 - -
Gma12g00405 441 MobiDBLite consensus disorder prediction 118 149 - -
Gma12g00405 441 Coils Coil 241 261 - -
Gma12g00405 441 MobiDBLite consensus disorder prediction 235 253 - -
Gma12g00405 441 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00405 Gma-Chr12 3320492 3326757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00405 339 422 bZIP Transcription Factor Family AT4G36730 39.286 6.02e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00405 - K22649 ccaj:109801299 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00405 12 3320492 3326757 Gma11g01098 11 9281331 9287073 GST