Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00386 ATGTTTTTTTCATGTAAAACATACAACCTCTACCTTCCCTGCTCCTCTGTTCCCCTGCGCAATTCAACATCATGCACCATTTTCAATTGTCAAAACCCAAACGAGCATCAGTCCATTCTCCGCAAACACAATTCCAAATCCACAGCATATCTCCTTCACCACCTCTCCCACAAGGATGGGGCACCCAACCCCATTCCCATTCCCAAACCCAGCGAGCTTCAAGACCCAATGCCCCACGAAGAAAAAGTCAAGGTTTTGGAGCTTTCCCTCGTCAGAAAAAGGACCCCTCAGTTCCCTGGCTCCATCTACGCTCAATCTCCCAGTGACTCCGATGTGGGTTCTTCTCTGCCCCCTCTCCGCACTCTGTTTCAATCAAGTGATGATAAAGACGACGACGAGGAGGAGAAGGAGATGATAATGCGCGCTCTCGATATTCGGAGGAAGGTCACTGAAGAGGTTTTCAAAGAAGCCATGCGAAAGGGAAAGTTTGGAATCACTTACACTACCAATTTGGTTGGCAGGTTATCCGGTTTCATTGATTACATCATGATTGAAGCTGCTAACTTGAAGAGATTGCCCGAATATTCAAACTCCACCTTCAATTTGCGCGCCAAAATTGTCATTGATGACTCTAAAGTTGTGCCACTTATTAGATGGTTGAAGCACAATGCACTATCATATCCCCGGATAGCGAAGCTTATTTTGATGTCAAGTGGAAAACTTGAGGCTGTCAGGAGTTTTGTCGAGTGGTTGAAATCGGTACATGTGAAAGGAGAGTTTCTCGGTGTTGTAATGGTGAATGCTGGGGAAAATATTTTCCAGCGCAGCCATGTGGAGCTGGATGAGATTGTTCTGTATTTGGAGTCCAATGGAGTCAGGAGGGATTGGATGGGTTATGTCATTAGTCGTTGTCCTCAGTTATTGTCTTATAGCTTAGATGAAGTGAAGAATCGTGCACAGTTCTACCATGATATGGGCTTAAATGAGAAAGATTTTGGCACAATGGTTTTTGATTTTCCTAAAGTTCTTGGTTACTATTCGCTGGAAGAAATGAATGCAAAGGTTAATTACTTAAAAGAATTTGGGCTTCAAACTAAGGATGTTGGCAGATTGCTTGCTTTTAGACCACAATTGATGGCATGCAGCATTGAAGAACAATGGAAGCCTCTTGTTAAGTATCTGTATTATTATGGGATCACTCAAGATGGTATGAGGAGAATGCTTACCATTAAACCAATGGTCTTTTGTGCTGACTTGCAGATGACTATTGTGCCAAAGGTACGGTTTTTTGAGGATATAGGGGTGCGCAATGATGCGATTGGCAACATGCTTGTGAAGTTTCCTCCTCTACTCACTTACAGTCTGAACAAGAAGATTAGACCAGTGGTCATATTCTTGATGACCAAAGCTGGAGTCAGTGAGAAAGATATCGCCAAGGTTGTAGCTCTTGGACCTGAGCTGTTGGGATGCAATATAGCACATAAGCTTGATCTAAATGTAAAATATTTTTTGTCTCTTGGCATACGTCTTCGGCAATTGGGTGAGATGATTGCTGATTTTCCAATGCTGCTCAGATACAATCCAGATGTCCTTCGTCCCAAATATGTTTATTTGCGAAAAACAATGGTCCGGCCTTTGCAAGATCTCATTGAGTTTCCAAGGTTTTTCAGCTATTCTCTTGAGGGTCGAATTATCCCAAGACATAAGGTTCTAGTGGAGAATCAGATTAATATTAAGCTAAGATACATGTTGACTAGCACTGACGAAGAATTCAACAAAATGGTCAAGGGCATAATTAGAAAGCGCCTCAGATTTGAATCTGCTGTCACAAATGAGGATACTACGTTAATACTGGAGACTACACCCCAGGCATAA 1875 0.4256 MFFSCKTYNLYLPCSSVPLRNSTSCTIFNCQNPNEHQSILRKHNSKSTAYLLHHLSHKDGAPNPIPIPKPSELQDPMPHEEKVKVLELSLVRKRTPQFPGSIYAQSPSDSDVGSSLPPLRTLFQSSDDKDDDEEEKEMIMRALDIRRKVTEEVFKEAMRKGKFGITYTTNLVGRLSGFIDYIMIEAANLKRLPEYSNSTFNLRAKIVIDDSKVVPLIRWLKHNALSYPRIAKLILMSSGKLEAVRSFVEWLKSVHVKGEFLGVVMVNAGENIFQRSHVELDEIVLYLESNGVRRDWMGYVISRCPQLLSYSLDEVKNRAQFYHDMGLNEKDFGTMVFDFPKVLGYYSLEEMNAKVNYLKEFGLQTKDVGRLLAFRPQLMACSIEEQWKPLVKYLYYYGITQDGMRRMLTIKPMVFCADLQMTIVPKVRFFEDIGVRNDAIGNMLVKFPPLLTYSLNKKIRPVVIFLMTKAGVSEKDIAKVVALGPELLGCNIAHKLDLNVKYFLSLGIRLRQLGEMIADFPMLLRYNPDVLRPKYVYLRKTMVRPLQDLIEFPRFFSYSLEGRIIPRHKVLVENQINIKLRYMLTSTDEEFNKMVKGIIRKRLRFESAVTNEDTTLILETTPQA 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00386 624 MobiDBLite consensus disorder prediction 99 135 - -
Gma12g00386 624 PANTHER CGI-12 PROTEIN-RELATED 62 613 IPR003690 GO:0003690|GO:0006355
Gma12g00386 624 MobiDBLite consensus disorder prediction 99 122 - -
Gma12g00386 624 SMART mt_12 478 509 IPR003690 GO:0003690|GO:0006355
Gma12g00386 624 SMART mt_12 546 577 IPR003690 GO:0003690|GO:0006355
Gma12g00386 624 SMART mt_12 441 473 IPR003690 GO:0003690|GO:0006355
Gma12g00386 624 SMART mt_12 369 400 IPR003690 GO:0003690|GO:0006355
Gma12g00386 624 SMART mt_12 514 544 IPR003690 GO:0003690|GO:0006355
Gma12g00386 624 SMART mt_12 298 328 IPR003690 GO:0003690|GO:0006355
Gma12g00386 624 SMART mt_12 405 436 IPR003690 GO:0003690|GO:0006355
Gma12g00386 624 SMART mt_12 333 364 IPR003690 GO:0003690|GO:0006355
Gma12g00386 624 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 62 613 - -
Gma12g00386 624 Pfam mTERF 228 360 IPR003690 GO:0003690|GO:0006355
Gma12g00386 624 Pfam mTERF 364 591 IPR003690 GO:0003690|GO:0006355
Gma12g00386 624 Gene3D Transcription termination factor 3, mitochondrial 374 599 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00386 Gma-Chr12 3170490 3174073 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma12g00386 mTERF 2.7e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00386 K15032 - gmx:100813633 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00386 12 3170490 3174073 Gma12g00386 12 3170490 3174073 ECH
Gma12g00386 12 3170490 3174073 Gma11g01073 11 9077644 9079428 GST