Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00362 ATGGCTTCCTCAAGTGGAACATCTTCAGGGTCATCTCTGCTTCAGAACTCTGGTTCTGAGGAGGATTTGCAGGCGGTGATGGATCAGAGAAAGAGGAAGAGAATGATATCAAACCGCGAATCTGCACGGCGATCTCGCATGAGGAAGCAGAAGCACTTGGACGATCTTGTTTCCCAAGTGGCTCAGCTCAGAAAAGAGAACCAACAAATACTCACAAGCGTCAACATCACCACGCAACAGTACCTGAGCGTTGAGGCTGAGAACTCGGTGCTTAGGGCTCAGGTGGGTGAGCTTAGTCACAGGTTAGAGTCTCTGAATGAGATCGTTGACGTGTTGAATGCCACCACTGTGGCGGGTTTTGGAGCAGCAGCAACATCGAGCACCTTCGTTGAGCCAATTAATAATAATAGCTTCTTCAACCCGTTGAATATGGGGTATCTGAACCACCCTATTATGGCTTCTGCGGATATATTGCAGTATTGA 483 0.4824 MASSSGTSSGSSLLQNSGSEEDLQAVMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVAQLRKENQQILTSVNITTQQYLSVEAENSVLRAQVGELSHRLESLNEIVDVLNATTVAGFGAAATSSTFVEPINNNSFFNPLNMGYLNHPIMASADILQY 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00362 160 PANTHER BZIP TRANSCRIPTION FACTOR 1 158 - -
Gma12g00362 160 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Gma12g00362 160 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Gma12g00362 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Gma12g00362 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Gma12g00362 160 MobiDBLite consensus disorder prediction 1 23 - -
Gma12g00362 160 Coils Coil 46 73 - -
Gma12g00362 160 Pfam bZIP transcription factor 30 77 IPR004827 GO:0003700|GO:0006355
Gma12g00362 160 MobiDBLite consensus disorder prediction 1 49 - -
Gma12g00362 160 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Gma12g00362 160 MobiDBLite consensus disorder prediction 24 49 - -
Gma12g00362 160 Gene3D - 28 87 - -
Gma12g00362 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00362 Gma-Chr12 2981086 2982527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00362 24 160 bZIP Transcription Factor Family AT4G34590 56.115 7.00e-50 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma12g00362 bZIP_1 2.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00362 K25786 - gmx:100101862 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00362 12 2981086 2982527 Gma12g00362 12 2981086 2982527 ECH
Gma12g00362 12 2981086 2982527 Gma11g01048 11 8893020 8893520 GST