Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00359 ATGAAGGACGCAGATGTGTCAAGGCAGATCCAGCAGATGATCAGGTTCATCCGTCAAGAGGCTGAAGAGAAAGCTAATGAAATATCTGTTGCTGCTGAAGAGGAATTCAATATTGAGAAACTGCAATTGCTTGAAGCTGAAAAAAGAAAGATCAGGCAAGAGTACGAACGAAAAGCCAAACAAATTGACGTTCGAAGAAAGATTGAATACTCAACACAACTGAATGCAGCCCGAATAAAAGTGCTTCAAGCACAAGATGATGCGGTGGGTGCTATGAAGGACGCTGCTAAAAAGGGGCTTTTACGTATCTCAAATGATAAGAAAGTATACAGGAAACTCGTCAAAGACATGATTGTTCAGGGTTTACTACGCCTGAGGGAACCATCAGTGCTATTAAGATGCAGAGAGAGTGACCGTAAGCTTGTTGAGTCATTGATAGAGGAAGCCAAAAAAGAATACTCGGAGAAAGCCAATATGCAAGCCCCTAAGATTGCCCTTGATGATCGTGTTTACCTCCCACCGTCGCCAAAGAACAGTGCCGTGGATTCCCATGAACCTTATTGCACCGGAGGAATAGTATTGGCCTCAGAGGATGGGAAGATTGTGTTGGAAAATACCCTTGATGCACGGCTTGATGTCATTTTCCGGCAGAAACTACCTGAGGTAAGGAAGCGCCTGTTAGGTTGA 687 0.441 MKDADVSRQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLQLLEAEKRKIRQEYERKAKQIDVRRKIEYSTQLNAARIKVLQAQDDAVGAMKDAAKKGLLRISNDKKVYRKLVKDMIVQGLLRLREPSVLLRCRESDRKLVESLIEEAKKEYSEKANMQAPKIALDDRVYLPPSPKNSAVDSHEPYCTGGIVLASEDGKIVLENTLDARLDVIFRQKLPEVRKRLLG 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00359 228 Pfam ATP synthase (E/31 kDa) subunit 16 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Gma12g00359 228 Coils Coil 38 61 - -
Gma12g00359 228 SUPERFAMILY V-type ATPase subunit E-like 88 227 - -
Gma12g00359 228 Gene3D - 92 228 IPR038495 -
Gma12g00359 228 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 ISOFORM X1 1 228 - -
Gma12g00359 228 Coils Coil 14 34 - -
Gma12g00359 228 Gene3D - 1 62 - -
Gma12g00359 228 Hamap V-type proton ATPase subunit E [atpE]. 8 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
Gma12g00359 228 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00359 Gma-Chr12 2949737 2951568 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00359 1 228 Primary Pumps ATPases(2) AT3G08560 69.737 3.11e-117 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00359 K02150 - gmx:100779392 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00359 12 2949737 2951568 Gma11g01046 11 8854364 8868186 GST