Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00357 ATGGATGCGCTAGCTGCTGAAGCTGAAGGACTCCATGACTGGAAGTTTTCCACGTCGCTTTCTGCACACTGTTTCTTTTCAGGCGTAAAATGCGACCAAGAACTTCGAGTCGTTGCTATCAATGTCTCGTTTGTTCCTCTCTTCGGCTACCTTCCGCCGGAGATCGGACAATTGGACAAACTCGAGAACCTCACTTCCCTCAAGCTCCTCGACATCTCTCACAACGTCTTCTCCGGCCAAATTATTCTTCCGATGACGAAACTGGAGGTCCTCGACGTCTACGACAACAACTTCACCGGACCGCTTCCCGTAGAGTTGGTGAAACTGGAGAAATTAAAATACCTGAAGCTCGACGGAAACTATTTCTCCGGCAGCATACCGGAGAGTTACTCGGAGTTTAAGAGCTTGGAGTTTTTAAGCTTAAGCACCAATAGCTTATCGGGGAAGATTCCCAAGAGTTTGTCGAAGTTGAAGACGCTGAGGTACCTAAAACTCGGATACAACAACGCTTACGAAGGTGGAATTCCACCGGAGTTTGGCAGCATGAAATCTCTGAGATACCTTGACCTCTCTAGCTGCAACCTCAGCGGCGAGATTCCACCGAGCCTTGCAAATCTGACAAACCTTGACACGTTGTTCCTGCAAATTAACAACCTCACCGGAACCATTCCGTCGGAGCTCTCCGCTATGGTGAGCCTCATGTCACTTGATCTCTCCATCAACGACCTCACCGGTGAGATACCGATGAGCTTCTCACAGCTTAGAAACCTCACTCTCATGAACTTCTTCCAAAACAATCTTCGCGGCTCAGTTCCGTCCTTCGTCGGCGAGCTTCCGAATCTGGAAACGCTGCAGCTCTGGGATAACAACTTCTCCTTCGTGCTACCTCCGAACCTTGGGCAAAACGGCAAGTTAAAGTTCTTCGACGTCATCAAGAATCACTTCACCGGGTTGATCCCTCGAGATTTGTGTAAAAGTGGGAGGTTACAAACGATCATGATCACAGATAACTTCTTCCGCGGTCCAATCCCTAACGAGATTGGTAACTGCAAGTCTCTCACCAAGATCCGAGCCTCCAATAACTACCTTAACGGCGTGGTTCCGTCAGGGATTTTCAAACTACCTTCTGTCACGATAATCGAGCTGGCCAATAACCGTTTTAACGGCGAACTGCCTCCTGAGATTTCCGGCGAATCCCTGGGGATTCTCACTCTTTCCAACAACTTATTCAGTGGGAAAATTCCCCCAGCGTTGAAGAACTTGAGGGCACTGCAGACTCTCTCACTTGACGCAAACGAGTTCGTTGGAGAAATACCGGGAGAGGTTTTTGACCTACCGATGCTGACTGTGGTCAACATAAGCGGCAACAATCTAACCGGACCAATCCCAACGACGTTGACTCGCTGCGTTTCACTCACCGCCGTGGACCTCAGCCGGAACATGCTTGAAGGGAAGATTCCGAAGGGAATCAAAAACCTCACGGACTTGAGCATTTTCAATGTGTCGATAAACCAAATTTCAGGGCCAGTCCCTGAGGAGATTCGCTTCATGTTGAGTCTCACCACATTGGATCTATCCAACAACAATTTCATCGGCAAGGTCCCAACCGGGGGTCAGTTCGCGGTCTTCAGCGAGAAATCCTTTGCAGGGAACCCCAACCTCTGTACCTCCCACTCTTGCCCGAATTCCTCGTTGTACCCTGACGACGCCTTGAAGAAGAGGCGCGGCCCTTGGAGTTTGAAATCCACGAGGGTGATAGTCATCGTGATTGCACTGGGCACAGCCGCGCTGCTGGTGGCGGTGACGGTGTACATGATGAGGAGGAGGAAGATGAACCTTGCGAAGACGTGGAAGCTGACGGCGTTCCAGCGGCTGAACTTCAAAGCCGAGGACGTGGTGGAGTGTCTGAAGGAGGAGAACATAATAGGAAAAGGAGGGGCAGGGATCGTGTACCGCGGGTCCATGCCAAACGGAACAGACGTGGCGATAAAGCGGTTGGTTGGGGCGGGGAGTGGAAGGAACGATTACGGATTCAAAGCGGAGATAGAAACGCTGGGGAAGATAAGGCACAGGAACATAATGAGGCTTTTAGGTTACGTGTCGAACAAGGAGACGAACTTGCTGCTGtatgagtacatgccaaatgggagcttaggggaatggctgcatGGTGCCAAAGGAGGGCACttgaagtgggaaatgaggtacaagattgcggtggaagctgctaagggactgtgctatttgcaccatgattgttcccctcttatcattcacagggatgtcaagtctaataatatattgctggatggggacttggaggcccatgttgctgattttggccttgccaagttcttgtacgaccctggcgcctctcagtccatgtcctccattgctggctcctacggctacattgctccagagtatgcatacactttgaaagtggacgagaaaagtgatgtgtacagctttggcgttgtgctgctggagctgataatagggaggaagccagtgggagagtttggagacggggtggacatcgttggatgggtcaacaaaacgagattggagcTCGCTCAGCCGTCGGATGCAGCGTTGGTGTTGGCAGTGGTGGACCCAAGGTTGAGTGGGTATCCATTGACAAGTGTCATTTACATGTTCAACATAGCTATGATGTGTGTTAAAGAAATGGGGCCCGCTAGGCCTACCATGAGGGAAGTCGTTCATATGCTCTCAGAGCCTCCTCACTCTGCTACTCACACTCACAACCTAATTAATCTCTAG 2784 0.4282 MDALAAEAEGLHDWKFSTSLSAHCFFSGVKCDQELRVVAINVSFVPLFGYLPPEIGQLDKLENLTSLKLLDISHNVFSGQIILPMTKLEVLDVYDNNFTGPLPVELVKLEKLKYLKLDGNYFSGSIPESYSEFKSLEFLSLSTNSLSGKIPKSLSKLKTLRYLKLGYNNAYEGGIPPEFGSMKSLRYLDLSSCNLSGEIPPSLANLTNLDTLFLQINNLTGTIPSELSAMVSLMSLDLSINDLTGEIPMSFSQLRNLTLMNFFQNNLRGSVPSFVGELPNLETLQLWDNNFSFVLPPNLGQNGKLKFFDVIKNHFTGLIPRDLCKSGRLQTIMITDNFFRGPIPNEIGNCKSLTKIRASNNYLNGVVPSGIFKLPSVTIIELANNRFNGELPPEISGESLGILTLSNNLFSGKIPPALKNLRALQTLSLDANEFVGEIPGEVFDLPMLTVVNISGNNLTGPIPTTLTRCVSLTAVDLSRNMLEGKIPKGIKNLTDLSIFNVSINQISGPVPEEIRFMLSLTTLDLSNNNFIGKVPTGGQFAVFSEKSFAGNPNLCTSHSCPNSSLYPDDALKKRRGPWSLKSTRVIVIVIALGTAALLVAVTVYMMRRRKMNLAKTWKLTAFQRLNFKAEDVVECLKEENIIGKGGAGIVYRGSMPNGTDVAIKRLVGAGSGRNDYGFKAEIETLGKIRHRNIMRLLGYVSNKETNLLLYEYMPNGSLGEWLHGAKGGHLKWEMRYKIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLDGDLEAHVADFGLAKFLYDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIIGRKPVGEFGDGVDIVGWVNKTRLELAQPSDAALVLAVVDPRLSGYPLTSVIYMFNIAMMCVKEMGPARPTMREVVHMLSEPPHSATHTHNLINL 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00357 927 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 4 918 - -
Gma12g00357 927 SUPERFAMILY Protein kinase-like (PK-like) 627 911 IPR011009 -
Gma12g00357 927 Gene3D Phosphorylase Kinase; domain 1 600 712 - -
Gma12g00357 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 757 769 IPR008271 GO:0004672|GO:0006468
Gma12g00357 927 Pfam Leucine rich repeat 424 482 IPR001611 GO:0005515
Gma12g00357 927 Gene3D Transferase(Phosphotransferase) domain 1 713 924 - -
Gma12g00357 927 SMART LRR_typ_2 374 398 IPR003591 -
Gma12g00357 927 SMART LRR_typ_2 182 205 IPR003591 -
Gma12g00357 927 SMART LRR_typ_2 85 109 IPR003591 -
Gma12g00357 927 SMART LRR_typ_2 206 230 IPR003591 -
Gma12g00357 927 SMART LRR_typ_2 421 445 IPR003591 -
Gma12g00357 927 SMART LRR_typ_2 133 157 IPR003591 -
Gma12g00357 927 SMART LRR_typ_2 517 550 IPR003591 -
Gma12g00357 927 SMART LRR_typ_2 278 302 IPR003591 -
Gma12g00357 927 PANTHER UNNAMED PRODUCT 4 918 - -
Gma12g00357 927 ProSiteProfiles Protein kinase domain profile. 636 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00357 927 SUPERFAMILY RNI-like 40 340 - -
Gma12g00357 927 Pfam Leucine Rich repeat 519 532 IPR001611 GO:0005515
Gma12g00357 927 SMART serkin_6 636 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00357 927 Pfam Leucine Rich Repeat 184 206 IPR001611 GO:0005515
Gma12g00357 927 Gene3D Ribonuclease Inhibitor 276 564 IPR032675 -
Gma12g00357 927 Gene3D Ribonuclease Inhibitor 2 149 IPR032675 -
Gma12g00357 927 Gene3D Ribonuclease Inhibitor 150 250 IPR032675 -
Gma12g00357 927 Pfam Protein tyrosine and serine/threonine kinase 637 909 IPR001245 GO:0004672|GO:0006468
Gma12g00357 927 SUPERFAMILY L domain-like 319 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00357 Gma-Chr12 2931145 2938634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00357 4 920 Receptor kinase-like Gene Family AT1G75820 61.465 0.0 1170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma12g00357 PK_Tyr_Ser-Thr 2.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00357 K00924 - gmx:732625 1745.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00357 12 2931145 2938634 Gma11g01045 11 8850578 8852580 GST