Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00354 ATGGTTCTAAGCAAGCTTGGTATCCAAGCTGATCATGTCAAATCTGACAAGTGCTTAGCAAACCTGAAGCCATATTCTTCTCAGTACCAAGATGGCAAAACCAAAGGAACTGATAAGGTGAAGAAAATGATGAAGTCAAGGTCATTTCAGCTTTCAGATTTCGAGCCTCCTCAATCACCACCTTCGGTCAGGAGCTTGTCCCAGCCAAGAAAGCCATCACCTCTTCATGTTCCAACTACTGCAGCATCCCCACAACAGCAGAAGGCTATGGTCAGAAGGTCACCCAATTACATGAAGCCTACCAGCAGTTCAGATGCAAAAAAGGAGCTTTTGCCGGTTAGTCATCGGAATACCCAATCTAGTTCAGATGGTAAGAGTCTACCACAAAAATGTATGAGAAATTCAAAAGCTAGCTATGTTTCTTGCAAAGAGCCTGCAAAAACTTTGTCAAGATCATCTAGTGTGAATTCAATGAGAACATTAACAAAGACTCCTAGTTTCAAGCCTTGTAAAGCTTGTTCAAGAGAATTCACATCAGCAGTTCTGTTTGAAGATGTGAATGCACCAGAGAGAGCTACCTGCTCTTCAACTTTGAAAGACTGCAAGTTTCCCGAGTACCTCATGCTTGACCCTGGGGGAACTGAGTCTGAGGGAGTTTCACTTATGAAGGTTTGCCCATATACATATTGTTCTCTTAATGGCCATGGTCATGGTCATTCTCCTTTGCCTCCATTGAAGAGCTTCATGTCAGCAAGGAGGCATCTTTTGGAGACTCAGAAGAATATAAAGGCGGAAGTTGCGAGCCCTCAAAGATGGAAGGTGCCCCCCTGTGATACAAAAAAAGACTCTTATAGTGAGCAGATTGTCTTTCATGGAAAACCTGCATGTGATGAAGCTGATACAGGTAATCCAACAATCACTCCCTTGGCACAAGAAATTGGTATGGATTTCTTCTTTGAAATCTATGCTAAGGAAAGGGAAGGAGATGGAAAAATGGGAAAATTCAACTCTTTCAAAGACCTTGAGGAGCAAGAAGATATCAATTTTGCAAATGACGAGAATGACATTGCAGCAGAAGAGGATGGAGTCAAGCAAGTTACTCCCGGAGTGACTCGTGACCTCCCGAAGTCTCAGATCAATTTCGAGGAGGATTTCAAAAACTATTTTGCTGATACTGCTGCAATTGAAGCAAATAGCAAGGGGAGCTTTCATCTAGGACAAAATGCTGAAGATGCAGATGAAAACCAGCCACCTAGCTGGTTTCATGAAGAAACCTGTTCAGGAAGCTGCTGCAATGAGACTAGCTATGATGGGGAACAGATGGAGAATATTGACTTGGATGAGTCTGATTCCCAATATAGTGATATGGACTGGGAGGAGGAACACTTCTGTGAATTCAACCATGAGGACGATACTGATTCTTCCATCTGCTCAATGGAGGAAACTGACTCAAAACTCGAGTCCTTATCAGAGAGTTCACATGATATATCTGAAATGCGGTTACACGACATCGTTAGCAGTCAATATGCAGACATTCTGGTTGAAGAAGCACTCCAAGAAGTTGAAGAAGAGAAAAGTACCTGTTTTGATGCACAACCTCATTGCACTAATTCTGTCCTGGAAGACACAAGTGAAAGCATCGAGTTTGTGACTCAAGAAACAGATTATCCATCCAATGATACAAGTTCTGAGAATGACCAATCTACTTCGACTGAGGAAGTATTTCAGCATCTGATAAATGCAGAAGATAACAGCAGAGAAAATGAAAAACATGTGGATTATGAGGTCAGTTGTGTTTCAATGGTACTTGATGAAGTTGAAAATAGTGAAGGCCACAAAACTAGTGAAATTTGTGAGATTGATGAGAGCAGTGAAGACAGAAATGCAAGCCTAGAGAATGATGATGATAATGGAATTAGCCAGGAGAACCAAATTCACTCGTCTGAAGTGCCAGAAGAAAGCACCATTGTTGTTCAGGAGCAGAAATTATCGGAGGAAAATCAAGTTAAAGGTAGTAAGTTGCCGAGCACAGGTGGTAGTGAAGAGCAGCACACGGGCAATAATAGGCAATGGGGAACTAAGCGGAAGAGACCTATGGAAGAGGATGAGGAAATGAGAAAGATCAACCCACGAAAGCCAAATTTCCTGCCCTTGGTTATTGAGCCAGAACCAGAGAAAGTTGAACTGAAGCACCAAATGATAGATGAAAGAAAAGATGCAGAGGAATGGATGCTTGATTTCGCTCTCAGACAAGCTGTCACGAGACTTGCTCCAGCAGGGAAAAGGAAGGTGTCATTGCTGGTTGAAGCTTTTGAAACAGTAATGTCAATGCCCAAATGTGAAGCCCGTATGAAAAATGATTCACCCTTTGCTCATGCAAGGCCTATTCAAGCGTGTAGCTGA 2403 0.4241 MVLSKLGIQADHVKSDKCLANLKPYSSQYQDGKTKGTDKVKKMMKSRSFQLSDFEPPQSPPSVRSLSQPRKPSPLHVPTTAASPQQQKAMVRRSPNYMKPTSSSDAKKELLPVSHRNTQSSSDGKSLPQKCMRNSKASYVSCKEPAKTLSRSSSVNSMRTLTKTPSFKPCKACSREFTSAVLFEDVNAPERATCSSTLKDCKFPEYLMLDPGGTESEGVSLMKVCPYTYCSLNGHGHGHSPLPPLKSFMSARRHLLETQKNIKAEVASPQRWKVPPCDTKKDSYSEQIVFHGKPACDEADTGNPTITPLAQEIGMDFFFEIYAKEREGDGKMGKFNSFKDLEEQEDINFANDENDIAAEEDGVKQVTPGVTRDLPKSQINFEEDFKNYFADTAAIEANSKGSFHLGQNAEDADENQPPSWFHEETCSGSCCNETSYDGEQMENIDLDESDSQYSDMDWEEEHFCEFNHEDDTDSSICSMEETDSKLESLSESSHDISEMRLHDIVSSQYADILVEEALQEVEEEKSTCFDAQPHCTNSVLEDTSESIEFVTQETDYPSNDTSSENDQSTSTEEVFQHLINAEDNSRENEKHVDYEVSCVSMVLDEVENSEGHKTSEICEIDESSEDRNASLENDDDNGISQENQIHSSEVPEESTIVVQEQKLSEENQVKGSKLPSTGGSEEQHTGNNRQWGTKRKRPMEEDEEMRKINPRKPNFLPLVIEPEPEKVELKHQMIDERKDAEEWMLDFALRQAVTRLAPAGKRKVSLLVEAFETVMSMPKCEARMKNDSPFAHARPIQACS 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00354 800 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 1 800 - -
Gma12g00354 800 Pfam Plant calmodulin-binding domain 688 776 IPR012417 GO:0005516
Gma12g00354 800 SMART CaM_binding_2 659 776 IPR012417 GO:0005516
Gma12g00354 800 MobiDBLite consensus disorder prediction 551 573 - -
Gma12g00354 800 MobiDBLite consensus disorder prediction 51 103 - -
Gma12g00354 800 MobiDBLite consensus disorder prediction 606 705 - -
Gma12g00354 800 MobiDBLite consensus disorder prediction 634 687 - -
Gma12g00354 800 MobiDBLite consensus disorder prediction 26 130 - -
Gma12g00354 800 MobiDBLite consensus disorder prediction 113 130 - -
Gma12g00354 800 MobiDBLite consensus disorder prediction 34 48 - -
Gma12g00354 800 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 800 IPR044681 GO:0005516
Gma12g00354 800 MobiDBLite consensus disorder prediction 606 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00354 Gma-Chr12 2914538 2916940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00354 682 800 Calmodulin-binding Proteins AT2G38800 46.667 2.52e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00354 - - gmx:102670203 1607.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00354 12 2914538 2916940 Gma11g01041 11 8818289 8820787 GST