Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00345 ATGAAGATCCAGTGTGATGTGTGCCACAAAGAAGTGGCCTCCTTCTTCTGCCCCTCAGATGAAGCCTCTCTCTGCCATGCTTGTGATCGCACCATCCACCATCCCAACAAGCTCTCAGAAAAACACAAACGCTTCTCTCTTCACCACCCCATTTCCACCAAAGACTCTCCTCTTTGTGATATCTGTCATGTATACAATATGGCTTGTGACAAGGTTTCGGTTTCAACAAGCAGCATTTCTGAGTACTTGATTCAGACCATTCCCGGTTATTGCATGGAAGATCTTCTAGATGCTTCATTCGCATGCAATAGTTTATCTAAGGATTATGAGCACCAATCAGCGTTTCAGAACCAAGATGTTCAAGTCAGCATGCGTTCGTTCCCACTGCAAACTTGGGTACCACAATCTCAAGGTGGATCCCCTCAACGTAGCTTTACTTCGAATCTTTATCCCCAGATTGATTCTTTAGTTGGAGTGATGGAAATGCCTAAAGCCAAAGCTGGTGAAGGATACTCCAATTGGATATATAATTATGACTACGCAGCTTACAAACTTCCTTCAATTTGTCCTCCATTGATCAAAAAAATGCAAACGCTCTCGTTAATCAATTGTATGTGA 618 0.4288 MKIQCDVCHKEVASFFCPSDEASLCHACDRTIHHPNKLSEKHKRFSLHHPISTKDSPLCDICHVYNMACDKVSVSTSSISEYLIQTIPGYCMEDLLDASFACNSLSKDYEHQSAFQNQDVQVSMRSFPLQTWVPQSQGGSPQRSFTSNLYPQIDSLVGVMEMPKAKAGEGYSNWIYNYDYAAYKLPSICPPLIKKMQTLSLINCM 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00345 205 CDD Bbox1_BBX-like 5 47 - -
Gma12g00345 205 SMART bboxneu5 4 47 IPR000315 GO:0008270
Gma12g00345 205 PANTHER B-BOX ZINC FINGER PROTEIN 22 66 118 - -
Gma12g00345 205 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 63 - -
Gma12g00345 205 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Gma12g00345 205 PANTHER B-BOX ZINC FINGER PROTEIN 20 66 118 - -
Gma12g00345 205 PANTHER B-BOX ZINC FINGER PROTEIN 20 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00345 Gma-Chr12 2853126 2854430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00345 1 63 C2C2-CO-like Transcription Factor Family AT1G75540 64.062 1.45e-20 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma12g00345 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00345 - - gmx:102669047 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00345 12 2853126 2854430 Gma11g01032 11 8750791 8752292 GST