Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00323 ATGGGAGAAAATGAAGAAGCGATGCAGAGGCTTCACTTTCTGAAGCAGCCGTTAAACATGGAGCAACTTAGCATCCCGCAATTCAACCCCTCGCAAATGCGCGCGAGGCAGCATCATCATCAGAATCAGTTCGACGGTGGGAACAGTAACAAGCGGGCGGGTATACCACCCTCCCACCCGCACCCGATCCCTCCCATTTCCCCCTACTCTCAGATCCCGGTGTCGCGTCAGCACAACAACATTTCCCCTACACCCACCCACACCCGATCACTCTCGCAGCCCTCGTTTTTCTCGCTCGACTCCCTCCCTCCCCTCAGCCCTTCCCCCTTCCGTGACTCCTCCTCGACTTCCGTGTCGGAAGCTGCTGACGTGTCCATGGAAGATCGCGACGTGAGTTCTCATTCCCTGTTGCCACCCTCACCTTTCTCCAGAACACTCAACAACAGTAATTTACCATTACCCCCTCGTAAAGCGCATAGACGCTCTAACAGTGACATTCCGTTTGGGTTTTCCACCGTTTTGCAATCCTCTCCGCCGCTTATCCCTCTTCGGAACCCCGTTTCAGCGAAACCTGCTCAGTTAGTCAAAAGAGAAACACCGTGGGACAGGGGTGTTGAGAATAATAATAATAATAATGTAGAGGGGTCCGGGGAGAAGAAATCCCCTGAAGGGGAAGTGGTGGATGATCTTTTCTCTGCTTACATGAATTTGGATAGCTTTGATGCGTTGAACTCTTCTGGGACAGATGATAAAAATGGAGGCGAAAATCGCGATGATTTGGATAGTAGAGCGAGTGGGACTAAGACCAATGGTGGTGACAGTAGTGATAATGAGGCCGAAAGTAGTGTTAATGAGAGTGGGGATGGTGGGGTGAGGCAGGGAGGGAATGAGAAGAGGGAAGGGATGAAGAGGAGTGCTGGGGGTGAGATTGCGCCCACCACTAGGCACTATAGGAGTGTCTCCATGGATAGTTTCATTGGGAAGTTGAATTTCGATGAGGAGTCGCCCAAGCTGCCTCCTTCCCCCGGGCAGAGAAGTGCTCTGATGTCGCCTGCTGGTGGAATTGATGGGAATTCGGCGGCCTTCAGCTTGGAGTTTGGAAATGGGGAGTTCAGTGGGCCTGAACTGAAGAAAATTATGGCCAATGAAAAGCTTGCTGAGATTGCCTTGATCGATCCAAAGCGTGCCAAAAGGATTTTGGCCAACCGGCAATCGGCTGCGCGATCCAAAGAGCGGAAGATGCGGTACATTTCGGAGCTAGAACACAAGGTTCAGACTCTACAGACAGAAGCCACCACACTATCTGCACAGCTTACTCTGTTACAGAGAGATTCGGCTGGACTCACTAACCAGAATAGTGAGTTGAAGTTTCGCCTTCAATCCATGGAACAACAAGCAAAGCTTCGAGATGCTCTAAATGAGGCGCTTACTGCTGAGGTTCAAAGACTAAAGCTTGCCACAGCTGAACTAAGTGGCGATTCGCATGGTTCTGGCTGTTTGATTCCTCAACATTCTGTCAATCCTCTGATGTTCcagcaacagcagcagcctcctactgcatcccaacaaaacattcatcttcaacagcaacaacagcaacagcagcagcatcagaatggtaaTGCCAACTCAAATTCCGACTTAAAACAATAG 1653 0.4785 MGENEEAMQRLHFLKQPLNMEQLSIPQFNPSQMRARQHHHQNQFDGGNSNKRAGIPPSHPHPIPPISPYSQIPVSRQHNNISPTPTHTRSLSQPSFFSLDSLPPLSPSPFRDSSSTSVSEAADVSMEDRDVSSHSLLPPSPFSRTLNNSNLPLPPRKAHRRSNSDIPFGFSTVLQSSPPLIPLRNPVSAKPAQLVKRETPWDRGVENNNNNNVEGSGEKKSPEGEVVDDLFSAYMNLDSFDALNSSGTDDKNGGENRDDLDSRASGTKTNGGDSSDNEAESSVNESGDGGVRQGGNEKREGMKRSAGGEIAPTTRHYRSVSMDSFIGKLNFDEESPKLPPSPGQRSALMSPAGGIDGNSAAFSLEFGNGEFSGPELKKIMANEKLAEIALIDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKLATAELSGDSHGSGCLIPQHSVNPLMFQQQQQPPTASQQNIHLQQQQQQQQQHQNGNANSNSDLKQ 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00323 550 MobiDBLite consensus disorder prediction 244 316 - -
Gma12g00323 550 MobiDBLite consensus disorder prediction 176 224 - -
Gma12g00323 550 MobiDBLite consensus disorder prediction 136 152 - -
Gma12g00323 550 Gene3D - 393 446 - -
Gma12g00323 550 SUPERFAMILY Leucine zipper domain 394 445 IPR046347 GO:0003700|GO:0006355
Gma12g00323 550 Pfam bZIP transcription factor 394 452 IPR004827 GO:0003700|GO:0006355
Gma12g00323 550 CDD bZIP_plant_RF2 395 446 IPR044759 GO:0003700|GO:0006355
Gma12g00323 550 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 392 455 IPR004827 GO:0003700|GO:0006355
Gma12g00323 550 MobiDBLite consensus disorder prediction 70 122 - -
Gma12g00323 550 MobiDBLite consensus disorder prediction 32 164 - -
Gma12g00323 550 Coils Coil 410 465 - -
Gma12g00323 550 PANTHER ZIPPER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 63 543 - -
Gma12g00323 550 SMART brlzneu 390 454 IPR004827 GO:0003700|GO:0006355
Gma12g00323 550 MobiDBLite consensus disorder prediction 512 550 - -
Gma12g00323 550 MobiDBLite consensus disorder prediction 32 49 - -
Gma12g00323 550 MobiDBLite consensus disorder prediction 265 289 - -
Gma12g00323 550 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 63 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00323 Gma-Chr12 2689628 2694153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00323 4 513 bZIP Transcription Factor Family AT4G38900 56.934 5.63e-172 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma12g00323 bZIP_1 2.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00323 - - gmx:780560 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00323 12 2689628 2694153 Gma12g00323 12 2689628 2694153 ECH
Gma12g00323 12 2689628 2694153 Gma11g01008 11 8538712 8542019 GST