Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00322 ATGGCCGCAGCAGCAGCAGCAACCACTCTCTCCTCTTCCCTTTCCAAACCCTCCTCTCTTACATTTCAAACCCACTCTTTCCCCATAACCCTACCCACTCCCCCTCGCGCCGCCGCCAAACCCCCTCTTCTCGTCTTCTCCAAAAACCCAATTTCCGACATCGTCTCCTCCACCTTCTCACGCGCCGAAGAAGGCGCGTGGGACGACGAGAAGCCGCGCGAGGAGTGCGGCGTGGTCGGCATATACGGCGACCCTGAGGCCTCGCGCCTCTGCTACCTTGCCCTCCACGCGCTCCAGCATCGCGGCCAAGAAGGCGCCGGAATCGTCACCGTCAACAACAACGTCCTCCAATCCATCACCGGCGTTGGCCTCGTCTCCGAAGTCTTCAACCAATCAAAACTCGACCAGCTCCCCGGCAGCCTCTCCATCGGCCACGTCCGCTACTCCACCGCCGGCCAATCCATGCTCAAAAACGTCCAGCCCTTCGTCGCCGGTTACCGCTTCGGCTCCGTCGGCGTGGCCCACAACGGCAACCTCGTCAACTATAAGACCCTCCGAACCAACCTCGAAGACAACGGCTCCATCTTCAACACCACCTCTGACACCGAGGTTGTCCTCCACCTCATCGCCACCTCCAAACACAGACCCTTCATTCTTCGAATCGTTGACGCCTGTGAAAAGCTCGAAGGGGCTTATTCTATTGTTTTCGTCACCGAGGACAAGCTTGTCGCCGTTCGAGACCCTTTCGGGTTTAGGCCTTTGGTTATGGGGAGAAGGAGCAACGGTGCTGTTGTTTTCGCTTCTGAAACCTGCGCGCTTGACCTAATTGAAGCGACTTATGAAAGGGAGGTTTACCCTGGTGAGGTTCTTGTGGTGGATAAAAACGGTATTCAGAGTCTCTGCCTCATGTCTCATCCTCAACCAAAACAATGCATTTTTGAACATATTTACTTTGCACTTCCCAATTCGGTTGTTTTTGGGAGGTCTGTGTATGAGTCTCGTAGACAATTTGGGGAGATTTTGGCTACTGAAAGTCCTGTGGATTGTGATGTTGTGATTGCTGTGCCTGACTCTGGTGTTGTGGCTGCGCTTGGTTATGCTGCGAAAGCTGGGGTTCCGTTTCAGCAGGGTTTGATTAGGTCGCACTATGTGGGGAGGACTTTCATTGAGCCCTCTCAGAAGATTAGGGACTTTGGTGTGAAGCTGAAGCTATCACCTGTTCGTGCTGTGCTTGAAGGTAAACGTGTTGTGGTTGTGGATGATTCCATTGTGAGAGGAACCACCTCGTCCAAGATTGTTAGGCTGTTGAAGGAGGCTGGTGCTAAGGAGGTTCACATGAGGATTGCGAGTCCTCCGATTATTGGTTCTTGTTACTATGGTGTGGATACTCCTAGCTCTGAGGAGTTGATTTCGAATAGGATGAGTGTGGAGGAGATAAGGGACTTTATTGGGTCGGATTCACTTGCCTTTTTGCCTTTTGATAGCTTGAAGAGGTTGTTGGGAAGTGAAAGTCCAAATTTTTGTTATGCTTGTTTCTCTGGGAATTACCCTGTGGAGCCAAGAGAGCTTAAAGTGAAGAGGGTTGGGGACTTTGTTGATGATGGCTTGAATGGAAGCTTGGAGTCTATTGATGGTGGTTGGGTTCAGGCAAACCGAAATCAAATCAAGAAACTACTAAACAAAAAGGAGCTAAAAATAAGCACTGGAATTAGACATTTCAAATTCACCTCAGCATGCCTGTCAACAACATGA 1752 0.5108 MAAAAAATTLSSSLSKPSSLTFQTHSFPITLPTPPRAAAKPPLLVFSKNPISDIVSSTFSRAEEGAWDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVNNNVLQSITGVGLVSEVFNQSKLDQLPGSLSIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYKTLRTNLEDNGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVYPGEVLVVDKNGIQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIRDFIGSDSLAFLPFDSLKRLLGSESPNFCYACFSGNYPVEPRELKVKRVGDFVDDGLNGSLESIDGGWVQANRNQIKKLLNKKELKISTGIRHFKFTSACLSTT 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00322 583 Pfam Glutamine amidotransferase domain 154 273 IPR017932 -
Gma12g00322 583 Hamap Amidophosphoribosyltransferase [purF]. 75 516 IPR005854 GO:0004044|GO:0009113
Gma12g00322 583 SUPERFAMILY PRTase-like 311 522 IPR029057 -
Gma12g00322 583 Pfam Phosphoribosyl transferase domain 350 445 IPR000836 -
Gma12g00322 583 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 76 295 IPR017932 -
Gma12g00322 583 Gene3D - 335 499 IPR029057 -
Gma12g00322 583 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 52 548 - -
Gma12g00322 583 TIGRFAM purF: amidophosphoribosyltransferase 76 517 IPR005854 GO:0004044|GO:0009113
Gma12g00322 583 CDD PRTases_typeI 338 449 IPR000836 -
Gma12g00322 583 CDD GPATase_N 76 326 IPR035584 -
Gma12g00322 583 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 76 517 IPR029055 -
Gma12g00322 583 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 52 548 - -
Gma12g00322 583 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 76 299 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00322 Gma-Chr12 2684552 2686936 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00322 68 549 PRT Gene Family AT2G16570 86.364 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00322 K00764 - gmx:100801720 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00322 12 2684552 2686936 Gma12g00322 12 2684552 2686936 ECH