Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00321 ATGTCGACGACTACGATAAGCCGCGAAGAATGCGGCGTGGTGGGCATATACGGCGACCCCGAGGCCTTGCACCTCTGCTACCTTGCCCTACATGCCCTCCAGCACCGCGGCCAAGAAGGCACCGGAATCGTCACCGTCAACAACAACGTCCTCCAACCCATCACCGGCATGGGCCTCGTCTCCGAAGTCTTCAACCAACTCCCCGGCAGCCCCTTCATCGGCCACGTCCACTACTCCACTGTCGGTCTGTCCATGCTAAAAAACGTCCAGCCCTTCGTCGCCGGCTACCGCTTCGGCTCCGTCCGCGTGGCCCACAACGGCAACCTCGTCAAACCCTTCCTTCTACGAATCGTTGACGCCTGTGAAAAGCTCAAAGGGGCTTATTCTTTTGTCTTCGTCACCGAGGACAAGCTTGTCGTCGTTCGCGACCCTTTCGGGTTCAGGCCTTTGGTTACGGGAAAGAGAAGCAACGGTTATGCTGCAAAAGCAAGGGTTGCGTATGAGCTGGGTTTGATTAGGTCGCACAATGCGGTGAGGGATTTCGTTGCGCCCTCTCAGGAGCTATCACCCGTTCGTGCTGTGCTCGAAGGTAAGCGTGTTGTGGTTGTGGATGATTCCATTGTGAGAGGAACCACCTCGTCCAAGATAGTTAATTAG 657 0.5632 MSTTTISREECGVVGIYGDPEALHLCYLALHALQHRGQEGTGIVTVNNNVLQPITGMGLVSEVFNQLPGSPFIGHVHYSTVGLSMLKNVQPFVAGYRFGSVRVAHNGNLVKPFLLRIVDACEKLKGAYSFVFVTEDKLVVVRDPFGFRPLVTGKRSNGYAAKARVAYELGLIRSHNAVRDFVAPSQELSPVRAVLEGKRVVVVDDSIVRGTTSSKIVN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00321 218 CDD PRTases_typeI 158 218 IPR000836 -
Gma12g00321 218 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 11 205 IPR017932 -
Gma12g00321 218 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 117 159 IPR029055 -
Gma12g00321 218 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 158 217 - -
Gma12g00321 218 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 7 110 - -
Gma12g00321 218 SUPERFAMILY PRTase-like 158 217 IPR029057 -
Gma12g00321 218 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 11 160 IPR029055 -
Gma12g00321 218 Pfam Glutamine amidotransferase domain 118 157 IPR017932 -
Gma12g00321 218 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 11 111 IPR029055 -
Gma12g00321 218 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 111 158 - -
Gma12g00321 218 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 158 217 - -
Gma12g00321 218 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 7 110 - -
Gma12g00321 218 Gene3D - 160 218 IPR029057 -
Gma12g00321 218 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 111 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00321 Gma-Chr12 2679873 2681041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00321 158 217 PRT Gene Family AT2G16570 66.667 7.49e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00321 K00764 - gmx:100801720 246.128