Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00304 ATGGCCTTGCCAGTGGTCGTCGACGCAGAGTACCTCAAAGAGGTCGACAAGGCTCGCCGCGATCTCCGCGCACTCATCGCTAACAGGAACTGCGCTCCTCTCATGCTTCGATTGGCCTGGCACGATGCCGGAACTTACGATGCTAAGACCAAGACTGGTGGACCTAACGGTTCGATCCGTAACGAGGAAGAGTATTCTCACGGCGCCAACAATGGCTTGAAGAAGGCTATTGATTTCTGTGAGGAAGTGAAGGAAAAACATCCTAAAATTACATATGCAGATCTCTACCAGCTTGCGGGTGTTGTTGCAGTTGAGGTTACCGGGGGTCCCACAATTGATTTCGCTCCTGGTAGAAGGGATTCAAAAATATCTCCTAATGAAGGGCGGCTTCCTGATGCTAAAAAAGGTGTTTCACATCTCCATGATATCTTTTATCGAATGGGCTTGACTGACCGAGATATTGTTGCACTATCTGGAGGACATACACTGGGGAGAGCACATCCAGAGAGATCAGGGTTTGATGGCCCTTGGACAGAGGACCCTCTGAAGTTTGATAACTCATACTTTGTGGAACTTTTGAAAGAAGATTCTGCTGGGCTGCTTAAACTTCCAACAGACAAGGCTTTATTGGAGGATGCTGAATTTCGCCGTTATGTTGAGCTATATGCAAAGGACGAGGATGCATTTTTTCGAGATTATGCTGAATCACATAAGAAACTTTCAGAGCTAGGCTTTGTGCCAAGTTCAAAGCCGATTTCTATTAAGGATGGGACCATACTGGCACAAGGTGCTGTAGGAGTTGTAGTTACTGCCGCAGTGGTGATCATCAGTTACTTGTATGAAGTTCGCAAAAGAGGGAAGTAA 864 0.4676 MALPVVVDAEYLKEVDKARRDLRALIANRNCAPLMLRLAWHDAGTYDAKTKTGGPNGSIRNEEEYSHGANNGLKKAIDFCEEVKEKHPKITYADLYQLAGVVAVEVTGGPTIDFAPGRRDSKISPNEGRLPDAKKGVSHLHDIFYRMGLTDRDIVALSGGHTLGRAHPERSGFDGPWTEDPLKFDNSYFVELLKEDSAGLLKLPTDKALLEDAEFRRYVELYAKDEDAFFRDYAESHKKLSELGFVPSSKPISIKDGTILAQGAVGVVVTAAVVIISYLYEVRKRGK 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00304 287 ProSiteProfiles Plant heme peroxidase family profile. 32 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g00304 287 ProSitePatterns Peroxidases proximal heme-ligand signature. 153 163 IPR019793 -
Gma12g00304 287 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 5 285 IPR044831 GO:0004601|GO:0034599
Gma12g00304 287 PANTHER L-ASCORBATE PEROXIDASE 3 5 285 - -
Gma12g00304 287 Gene3D - 18 244 - -
Gma12g00304 287 ProSitePatterns Peroxidases active site signature. 32 43 IPR019794 GO:0004601
Gma12g00304 287 CDD ascorbate_peroxidase 4 245 - -
Gma12g00304 287 Pfam Peroxidase 19 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g00304 287 Gene3D Peroxidase, domain 2 131 237 - -
Gma12g00304 287 PRINTS Haem peroxidase superfamily signature 32 46 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g00304 287 PRINTS Haem peroxidase superfamily signature 90 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g00304 287 PRINTS Haem peroxidase superfamily signature 108 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g00304 287 PRINTS Haem peroxidase superfamily signature 153 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g00304 287 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma12g00304 287 PRINTS Plant ascorbate peroxidase signature 11 31 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gma12g00304 287 PRINTS Plant ascorbate peroxidase signature 32 47 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gma12g00304 287 PRINTS Plant ascorbate peroxidase signature 50 60 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gma12g00304 287 PRINTS Plant ascorbate peroxidase signature 64 88 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gma12g00304 287 PRINTS Plant ascorbate peroxidase signature 89 107 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gma12g00304 287 PRINTS Plant ascorbate peroxidase signature 108 120 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gma12g00304 287 PRINTS Plant ascorbate peroxidase signature 129 146 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gma12g00304 287 PRINTS Plant ascorbate peroxidase signature 147 168 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gma12g00304 287 PRINTS Plant ascorbate peroxidase signature 169 193 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gma12g00304 287 PRINTS Plant ascorbate peroxidase signature 221 245 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gma12g00304 287 SUPERFAMILY Heme-dependent peroxidases 11 245 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00304 Gma-Chr12 2447477 2453297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00304 90 244 Peroxidase AT4G17690 33.333 2.91e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00304 K00434 - gmx:100170727 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00304 12 2447477 2453297 Gma12g00304 12 2447477 2453297 ECH
Gma12g00304 12 2447477 2453297 Gma11g00977 11 8297776 8301767 GST