Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00296 ATGGGCAGCACTAGCAGCTATGTTTCAAGCAGCAGCAGCAGCAGCAAATGGCTGGGCTTCGTGGCGGCCGTGTGGATTCAATGCATCTCCGGCAACAACTACACTTTCTCAAACTACTCCGACGCCCTCAAATCCCTCATGCACCTCACTCAGCTCCAACTCAACAACCTCTCCGTCGCTAAAGACGTTGGCAAAGCCTTTGGGCTTCTGGCGGGCCTCGCCTCCGACCGCTTCCCCACTTGGGCTATTCTCCTCATTGGCTCCGTCGAAGGCCTTATTGGCTACGGAGCCCAATGGCTCGTTGTTAGCCAGAGAATTCAGCCCCTCCCTTACTGGCAGCTGTGCGTGTTTCTCTGCATGGGAGGCAACAGCACCACTTGGATGAACACTGCCGTTTTGGTAACATGCATTCGGAACTTCCGTTCAAACAGAGGACCCGTTTCGGGGATTCTGAAAGGCTTTGTAGGCTTGAGCACTGCGATATTCACTACTCTCTGTTCCGCGCTCTTCGCCGACGACCCTGGCTCCTTCCTCATCATGCTCTCTGTCATTCCCTTCGCAGTTTGCCTCACCGGTGTGTTTTTCCTCCGGGAGACTCCCCCCGACGTCTCCGCCGGTGATGACGACGGCGAAGAGGTAAAGTACTTCGGCTTCTTCAACGTGGTGGCGGTGGCGGTGGCGCTTTTTCTGTTGGCGTATGGGTTCATCCCCAGCCCTAGCATGTTGGTGTCAAGATTGTTTGTGGCGGTTTTGGTGGTGATGCTGGCTTCGCCGTTGGGGATCCCGGTGTACTCGTACTTGAAGGGACGGCTCGGAGGGGGAAATGACGTGGAGAGGCAGAGGCTGAAGGAGCCGTTGCTTCAGATTCCGGAGAAGGAGAATGAAGGCGTGGTGGCGGAGGAAGAGGCGGAGATAGTGAAGAGGGCGCCGGAGGTGGGTGAGGAGCACACGATAGTGGAGGCGCTGAGAAGCGTAGATTTTTGGATCTTGTTCGTGTCGTTTTTGTGTGGGGTTGGGACGGGTTTGGCAGTGATGAACAATATGGGTCAAATCGGGTTGGCGCTCGGATACCCAGATATCTCGCTCTTTCTGTCTTTGACAAGTATTTTCGGGTTTTTCGGACGGATAATCTCGGGTACCGTTTCGGAGTTCACCATCAAGAAAGCTGCAACACCTAGGCCTCTTTGGAATGCAGCATCTCAGCTTCTAATGGCGGTAGGTTACATACTCCTGGCCATGGCTATGCCAGGTTCCCTATACATTGGGTCTATTTTAGTTGGCATGTGTTATGGAGTGAGGCTTGCCATTACAGTCCCTACAGCCTCAGAGTTATTTGGACTCAAATATTATGGTCTCATCTATAACATTCTCATCCTTAACCTTCCTCTCGGTTCTTTCCTTTTCTCTGGTCTGCTTGCTGGCATACTCTATGATATGGAGGCAACTACAACAGAGGGAGGAGGCAACACATGTGTTGGAGGCAGTGATTCAGAATGGTATGACATTCCTGGGATTGATGAACTTTATGCTCAAGTGATATCTCAGTATCCGTCAGCGAGGGAATCCACATTCATTATCCCGAGGGCCGTGGTTCTTGGATCAGGCGCACGTGAGTGA 1617 0.5275 MGSTSSYVSSSSSSSKWLGFVAAVWIQCISGNNYTFSNYSDALKSLMHLTQLQLNNLSVAKDVGKAFGLLAGLASDRFPTWAILLIGSVEGLIGYGAQWLVVSQRIQPLPYWQLCVFLCMGGNSTTWMNTAVLVTCIRNFRSNRGPVSGILKGFVGLSTAIFTTLCSALFADDPGSFLIMLSVIPFAVCLTGVFFLRETPPDVSAGDDDGEEVKYFGFFNVVAVAVALFLLAYGFIPSPSMLVSRLFVAVLVVMLASPLGIPVYSYLKGRLGGGNDVERQRLKEPLLQIPEKENEGVVAEEEAEIVKRAPEVGEEHTIVEALRSVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYPDISLFLSLTSIFGFFGRIISGTVSEFTIKKAATPRPLWNAASQLLMAVGYILLAMAMPGSLYIGSILVGMCYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTEGGGNTCVGGSDSEWYDIPGIDELYAQVISQYPSARESTFIIPRAVVLGSGARE 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00296 538 CDD MFS_Mch1p_like 16 493 - -
Gma12g00296 538 Pfam Nodulin-like 16 263 IPR010658 -
Gma12g00296 538 SUPERFAMILY MFS general substrate transporter 17 479 IPR036259 -
Gma12g00296 538 Gene3D MFS general substrate transporter like domains 14 207 IPR036259 -
Gma12g00296 538 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 494 - -
Gma12g00296 538 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 6 494 - -
Gma12g00296 538 Gene3D MFS general substrate transporter like domains 282 493 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00296 Gma-Chr12 2361663 2365990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00296 16 493 Nodulin-like Gene Family AT4G34950 67.913 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00296 - - gmx:100807372 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00296 12 2361663 2365990 Gma12g00296 12 2361663 2365990 ECH
Gma12g00296 12 2361663 2365990 Gma11g00968 11 8212436 8216889 GST