Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00285 ATGGCGGCTACTGTGTCTTCTGCTTGGTCAAAGCCCGGCGCGTGGGCCCTAGATTCCGAGGAACACGAAGCCGAGCTCCTTCAACAGAACAACAACAACCCCAACGACAAGCCACTCGCCGACTTCCCCTCCCTTGCCGCCGCCGCCGCCACCAAGCCCAAGAAGAAGAAGGCCCAGACCTACTCCCTCGCCGAATTCACCGCCAAGCCCGACTCCGCCTTCGCCGACCAAGATCCCGTCGTCCTCCCCACCGGCCCCCGCCAGCGCACCGCCGAGGAGCTCGACCGCACCCGTCTCGGTGGCGGCTTCCGCAACTATGGCGACCGCCCCAACAGGAATAACTCCTCCGGCGGCGACGAGTCTTCCAATTCCCGCTGGGGTTCATCTAGGGTTTCTGACGAGCCCAGGAGAAACGGTTTTGGGGCTAGGGATTCCAATCGCGAGCTTCCCCCTTCGCGCGCTGACGAAACTGATAATTGGGCCGCCGCGAAGAAACCCTCCGGGGGGTTTGAAAGGAGGGAGAGGGACAAAGGAGGGTTTTTCGATTCGCAGTCGCGCGCTGATGAATCTGACAGCTGGGTTTCGAATAAGAGTTTCGTGCCTTCTGAAGGGCGGAGATTCGGTTCCAACGGCGGCGGGTTCGAGCGAGAGAGGAGGGTTGTTGGGTTCGGCTCCAGCGGCGGCGCGGATTCCGACAATTGGAACACAAAGAAGGGCGAGTCCAACGTTGGTAGCGAGAGTGTTGGTGGGAGGCCGAAGCTTGTGTTGCAACCTCGGACAGTGTCCGTGAGCGATGAAGGGGTTGATGGCAATAATGCGGGGAAGCCTAAAGGTGTTAATCCGTTCGGAGAGGCGAGGCCGAGGGAGCAGGTTTTGGCGGAGAAAGGGCAGGATTGGAAGAAGATTGATGAGCAGCTTGAGAGCGTCAAGATTAAGGAGGCAAGTGGTGGTGATGGGTTTGGAAAGAGGGGTTTTGGCTCTTCCAACGGTGGTGGAGGACGTGCTACTTTGCCTGAAAGTCGCACTGAGAGGAGTTGGAGGAAGCCCCAATTTGATGATGATCGTCCTAAAAGTGCTGAGAAAGTGGAAGATGAACCTGATCAAAAAAAGGAAGTGGAAGATGAACACGATGTTCATGTTCATGAGTTTTCACCAAAAAAAGAAGAAAAGAGGATGTTCATGTTCAACTCAATGATATATGTAATCGCCATGGATAACTCGGATATTCAGAATCCCTCTCGATGTAGAGAGTTGCAGAGAATAACAAAGGCTTCCTCTACCCGCTAG 1287 0.5571 MAATVSSAWSKPGAWALDSEEHEAELLQQNNNNPNDKPLADFPSLAAAAATKPKKKKAQTYSLAEFTAKPDSAFADQDPVVLPTGPRQRTAEELDRTRLGGGFRNYGDRPNRNNSSGGDESSNSRWGSSRVSDEPRRNGFGARDSNRELPPSRADETDNWAAAKKPSGGFERRERDKGGFFDSQSRADESDSWVSNKSFVPSEGRRFGSNGGGFERERRVVGFGSSGGADSDNWNTKKGESNVGSESVGGRPKLVLQPRTVSVSDEGVDGNNAGKPKGVNPFGEARPREQVLAEKGQDWKKIDEQLESVKIKEASGGDGFGKRGFGSSNGGGGRATLPESRTERSWRKPQFDDDRPKSAEKVEDEPDQKKEVEDEHDVHVHEFSPKKEEKRMFMFNSMIYVIAMDNSDIQNPSRCRELQRITKASSTR 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00285 428 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 362 - -
Gma12g00285 428 MobiDBLite consensus disorder prediction 340 385 - -
Gma12g00285 428 MobiDBLite consensus disorder prediction 288 311 - -
Gma12g00285 428 MobiDBLite consensus disorder prediction 108 129 - -
Gma12g00285 428 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 362 IPR010433 GO:0003743
Gma12g00285 428 MobiDBLite consensus disorder prediction 130 160 - -
Gma12g00285 428 Pfam Plant specific eukaryotic initiation factor 4B 6 310 IPR010433 GO:0003743
Gma12g00285 428 MobiDBLite consensus disorder prediction 167 184 - -
Gma12g00285 428 MobiDBLite consensus disorder prediction 185 203 - -
Gma12g00285 428 MobiDBLite consensus disorder prediction 228 243 - -
Gma12g00285 428 MobiDBLite consensus disorder prediction 1 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00285 Gma-Chr12 2280153 2282703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00285 1 348 Eukaryotic Initiation Factors Gene Family AT4G38710 51.515 2.18e-65 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00285 - - gmx:100820014 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00285 12 2280153 2282703 Gma12g00285 12 2280153 2282703 ECH
Gma12g00285 12 2280153 2282703 Gma11g00959 11 8134896 8137335 GST