Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00283 ATGGAGAGATCCTATGATGTCTTTGTTTTTCTCCTTGTCTCGGTTCTTTGTCTCTTCCTGTCCCAACCAGCAAGATCACAAGATGATTCACAACCGCTTCTGGCATTGAAATCCTCCATAGACGTTCTCAACAAGCTTCCATGGCGAGAAGGAACCGACGTGTGCACGTGGTTAGGGGTCAGAGACTGCTTCAACGGAAGAGTGAGGAAGCTAGTTCTGGAACACTCCAACTTAACCGGTTCTCTGGATTCCAAGATCTTGAACCGTTTGGACCAGCTCCGAGTCCTCAGTTTCAAAGGAAACTCGCTCTCCGGGCAAATACCCAACATCTCCGCCTTGGTCAACCTCAAATCGATTTTCCTCAACGAAAACAACTTCTCCGGCGATTTTCCCGCCTCCGTCGCCCTCCTCCACCGCGTGAAAGTCATTGTACTGTCGCAAAACCATATCTCCGGCGAAATTCCGGCGTCGCTGCTGAATCTCCGGCGACTGTACGTTCTCTACTTGCAAGACAACGCGTTGACTGGACGCATTCCCGGTTTCAACCAGAGCAGCCTCAGGTATTTAAACGTTTCGAAAAACCGTCTATCCGGCGAGATTCCGGTGACGTCGGCATTGATCCGGTTCAATGAGTCGTCGTTTTGGGGGAACCCGGGGCTCTGCGGGGAACAGATCGAAGAAGCATGCAAAAACGGAAGCGGTTCATTGCCGCCATCGATAAGCCCTAGCTATCCGTTGAAACCGGGAGGAACAACGTCAACGACGATGGGGAAATCGAAGCGCACGAAATTGATAAAGATAATTGGAGGGAGCGTTGGGGGAGTTGTTTTTGCATTAGGATGCGTGGTTTTGGTGTGGGTGATTTGCAGGAAGTGGAAAAGAaggaggaggaggaggaggaggaggaAGGGTGGTGCTGAAGTGGCAGAAGGGGAAGTGGGTGCGGCGGGAAGTGGGGGAGGAGGTGATAATAGTAAAGAAGAAGAAGGTGGGGGGTTTGCGTGGGAAAGTGAGGGTATAGGGAAGCTGGTGTTCTGCGGAGGAGGGGATGGGGACATGAGTTATAGTTTGGAGGATTTGCTCAAGGCTTCGGCGGAGACACTGGGGAGGGGTATAATGGGAAGTACGTATAAGGCAGTGATGGAATCGGGGTTCATAGTTACTGTGAAGAGGTTGAAAGATGCAAGGTACCCTGGCTTGGAAGAGTTCAGTGCTCACATTCAAGTCCTTGGGAGGCTCACCCACCCTAACCTCGTCCCTCTCAGGGCTTATTTCCAGGCTAAGGAGGAACGCCTCCTCGTTTATGATTACTTTCCTAATGGCAGCCTCTTCTCCCTTATTCACGGATCGAAAACATCTGGTGGGGGAAAGCCTCTTCACTGGACATCCTGCCTTAAAATTGCTGAGGATCTAGCAACAGGCATGCTCTATATCCACCAGAACCCTGGCTTGACACATGGAAACCTGAAATCTTCTAATGTATTGTTGGGTTCTGACTTTGAGTCATGTCTTACTGATTATGGTCTCACTGTGTTCCTTAATCCTGACACAATGGATGAGCCTAGTGCAACTTCTTTGTTCTATAGAGCACCTGAATGCCGCAACTTTCAAAGGTCACAAACTCAACCAGCTGATGTATACAGTTTCGGGGTCCTTCTTCTTGAGCTTTTAACTGGCAAAACACCCTTCCAAGACCTTGTTCAGACATATGGTTCAGACATACCTAGGTGGGTTCGGTCAGTGCGCGAAGAGGAGACGGAGTCTGGGGATGATCCTGCTTCAGGCAATGAAGCATCTGAAGAGAAGCTTCAGGCTCTTTTGAACATTGCAATGGCATGTGTTTCACTAGTGCCGGAGAACAGGCCTACAATGAGAGAAGTTTTAAAGATGATAAGAGATGCAAGAGGGGAGGCTCATGTCTCATCTAACAGTAGTGATCACTCCCCTGGTAGATGGTCAGATACTGTTCAAAGCTTTCCAAGGGAAGAACACCAGAGCATATGA 2004 0.4875 MERSYDVFVFLLVSVLCLFLSQPARSQDDSQPLLALKSSIDVLNKLPWREGTDVCTWLGVRDCFNGRVRKLVLEHSNLTGSLDSKILNRLDQLRVLSFKGNSLSGQIPNISALVNLKSIFLNENNFSGDFPASVALLHRVKVIVLSQNHISGEIPASLLNLRRLYVLYLQDNALTGRIPGFNQSSLRYLNVSKNRLSGEIPVTSALIRFNESSFWGNPGLCGEQIEEACKNGSGSLPPSISPSYPLKPGGTTSTTMGKSKRTKLIKIIGGSVGGVVFALGCVVLVWVICRKWKRRRRRRRRRKGGAEVAEGEVGAAGSGGGGDNSKEEEGGGFAWESEGIGKLVFCGGGDGDMSYSLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPGLEEFSAHIQVLGRLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGMLYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDTMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLLLELLTGKTPFQDLVQTYGSDIPRWVRSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDARGEAHVSSNSSDHSPGRWSDTVQSFPREEHQSI 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00283 667 ProSiteProfiles Protein kinase domain profile. 362 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00283 667 Gene3D Phosphorylase Kinase; domain 1 350 437 - -
Gma12g00283 667 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 28 655 - -
Gma12g00283 667 MobiDBLite consensus disorder prediction 299 331 - -
Gma12g00283 667 SUPERFAMILY L domain-like 33 222 - -
Gma12g00283 667 SUPERFAMILY Protein kinase-like (PK-like) 366 642 IPR011009 -
Gma12g00283 667 MobiDBLite consensus disorder prediction 638 667 - -
Gma12g00283 667 Pfam Protein kinase domain 365 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00283 667 MobiDBLite consensus disorder prediction 641 667 - -
Gma12g00283 667 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 28 655 - -
Gma12g00283 667 Gene3D Transferase(Phosphotransferase) domain 1 438 654 - -
Gma12g00283 667 Gene3D Ribonuclease Inhibitor 145 231 IPR032675 -
Gma12g00283 667 Gene3D Ribonuclease Inhibitor 28 138 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00283 Gma-Chr12 2261294 2265872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00283 15 667 Receptor kinase-like Gene Family AT1G60630 62.142 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma12g00283 Pkinase 2.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00283 - - gmx:100809866 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00283 12 2261294 2265872 Gma11g00956 11 8084310 8102197 GST