Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00261 ATGTCAACCTTTGACGTGGTCGTGGGCGACATCGTGTGCTTGAAGATCGGCGATCAGACTGGCACAAAGGTCACTGATGGTTTTGCACGCATGCTTGTTACTTCTGTGGGAATGAACACTGCATGGGGTGCAATGATGGGTTCCATGACCAAAGAGATTGATGAGGAGACACCTTTGCAAGTGCGTCTCAATAAGTTGACTTCTGCTATTTGCAAGGTTGGGTTGTCGGTGGCTGCACTTGTCTTTGGGGTGTCTATGGCACGTTACTTCTCGGGTTGCACGAGGGATGAGTTTGGGAACCGGGAATTCGTTCGGAGAAGGACTGAGTCTGATGATGTTGTGAATGCGGTTGTTGGGATTGTTGTGGCCGCAGTGAGGATTGTGGTGGTGGCGATCCCTGAAGGGCTGCCGCTTGCTGTTACTATGACTCTGGCTGCCGCAGTGTCCACTGGAAGGGTGCTGCTGAGATGA 471 0.5202 MSTFDVVVGDIVCLKIGDQTGTKVTDGFARMLVTSVGMNTAWGAMMGSMTKEIDEETPLQVRLNKLTSAICKVGLSVAALVFGVSMARYFSGCTRDEFGNREFVRRRTESDDVVNAVVGIVVAAVRIVVVAIPEGLPLAVTMTLAAAVSTGRVLLR 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00261 156 PANTHER CALCIUM-TRANSPORTING ATPASE 20 146 - -
Gma12g00261 156 PANTHER CATION TRANSPORTING ATPASE 20 146 - -
Gma12g00261 156 Pfam E1-E2 ATPase 20 150 - -
Gma12g00261 156 Gene3D - 13 152 - -
Gma12g00261 156 SUPERFAMILY Calcium ATPase, transmembrane domain M 50 148 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00261 Gma-Chr12 2055041 2055633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00261 1 149 Primary Pumps ATPases AT3G22910 51.337 1.59e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00261 K01537 - gmx:100787728 197.593