Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00259 ATGTCGCGCCAGACGACGTCGTCTGCTTTCACTAAATCGAAGACCCTCGACAATAAATATATGCTGGGAGATGAGATTGGAAAAGGAGCTTATGGTCGAGTTTACAAAGGTTTGGACCTGGAGAATGGAGATTTTGTTGCCATTAAACAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTCAACATTATCATGGTATATAATAATTTGAACCACAAAAACATTGTAAAGTATCTTGGATCTTCAAAGACAAAAAGTCACCTGCACATAGTTCTTGAGTATGTGGAGAATGGCTCACTTGCAAATAATATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCATTGGTTGCACTATATATTGCCCAGGTGTTGGAAGGTTTGGTTTATCTACACGAACAGGGTGTTATCCATCGGGATATTAAGGAAAATTTGCTCTTTTTTTTCTTTCTAAATACTAATTACATTAACTTCTGCTTTCAGGGTCTTGTCAAACTTGCTGATTTTGGTGTTGCTACAAAATTAACAGAGGCTGATGTTAACACTCATTCAGTTGTTGGAACACCTTACTGGATGGCCCCAGAGGTTATCGAAATGGCTGGGGTTTGTGCAGCTTCTGACATTTGGAGTGTTGGCTGTACGGTTATTGAACTTCTGACATGTGTACCTCCTTATTATGATTTGCAGCCTATGCCAGCTCTTTTCCGTATTGTCCAGGATGAGCATCCACCAATTCCAGATAGCCTTTCACCTGATATTACTGATTTTTTGCTTCAATGCTTTAAGAAGGATGCTAGACAAAGACCTGATGCTAAAACTCTGTTGTCTCACCCCTGGATTCAAAACTTTAGACGTGCCCTGCAGTCTTCTCTTCGTCATAGTGGAACACTAAGAAATATTGAAGATGATTCTGCAGATGCAGAAGTTTCTGGTGGTTATCATAAGAGTGCTTATGAAAACTCTTCTGTGGAGAAAGAGGAGTCTGCAAAAGAGCATACAAGTGTGGCTGCTGATGGCAGCAAAGCTCATGAAGACAATGCTGCAGATGATGTTCCACCGGATCAGGTTCTTACCTTAGCCATTCGTGAGAAGTCATTTCTACAAGCTGGTTCTAACAGAGAAGTGGTTAATTCCGAGTCTACTGGCAATCATGAAATTTCTAACGCTAAAGATCTTCATGAAGTTGTGAAGAATGGAGAAGTTGGATCTCCACAATCAAGAGGAATGGCTAACAAGTTTGGAGGAAAAGACAATTCTGTAAACAATGGCAACAAATCATTTGCTTTTGGGCCAAGAGGTCAAGATAATGATTTCCTTAAGGCAATGAAGATGCCAACCACTGTGGAAGGGAATGAGCTGAGTAGATTTAGTGACCCGCCAGGAGATGCCTACTTGGATGATTTATTTCATCCATTGGATAAACAACCTGGAGAGGTTGTAGCAGAAGCGTCCACATCTACATCCACTTCACATATGACTAAAGGTTATGCATCGGCAATTGATGGTGGGAAAAATGACCTGGCTAAAGAGTTGAGAGCTACAATTGCTCGAAAGCAATGGGAGAAGGAAACTGAAATTGGACAGGCAAACAATGGTGGGAATCTTTTGCACCGAGTGATGATAGGCGTTCTAAAAGATGAGGTGATTGATATAGATGGTTTGGTCTTCGACGAAAAACTTCCTGGAGAGAACCTTTTTCCTTTGCAGGCTGTTGAGTTCAGCAAACTAGTCAGTTCATTAAAACCAGAGGAATCAGAAGACGTGATTGTTTCTGCATGTCAGAAACTTATTGGTATATTTCACCAGCGTCCAGAGCAGAAGATTGTTTTTGTTACCCAGCATGGCTTACTTCCTCTAACAGATTTGCTAGAAGTTCCCAAAACACATGTCATATGTTCCGTGCTTCAACTTATAAATCAAATAGTTAAGGACAACACTGATTTTCTAGAAAATGCATGTCTTGTTGGATTGATTCCTGCAGTCACAAGCTTTGCAGTACCTGATCGTCCTCGAGAGATTCGTATGGAAGCGGCTTATTTTTTACAGCAGCTTTGTCAGTCAAGTTCTTTAACATTACAAATGTTTATAGCTTGCCGCGGAATACCTGTTTTAGTGGGATTTCTTGAGGCTGATTATGCCAAGTACAGGGAGATGGTTCATCTGGCTATTGATGGCATGTGGCAGGTATTTAAGCTTCAGCAGTCAACTCCTAGAAATGATTTTTGCCGAATAGCTGCTAAGAATGGAATACTTCTCAGGCTTATAAATACTCTTTATAGCTTAAACGAGTCAACTCGACTAGCTTCTAGCTCTGCTGGGGATGGATTTTCAGTTGATGGTTCAGCTCAACGCCCACGATCTGGTATCTTGGATCCCAATCATCCTTCTATCAATCAGAATGAGACAGTGTTATCTTCAGTAGATCAGCAAGAACCCCCTAAAGTGAGACATGCAGTACCTGATCATCACTTAGAACCTTCATCATCCAATCCTCGAAGATCAGATGCTAACTACCCTGTGGATGTTGATAGACCCCAATCAAGCAATGCGACAGCTGATGAAAAGAGTTCGACCCAAACATCCAGAGAATCTTCGGCAAGTGCATTGAAAGAGCGAGGGAATATGGATCGTTGGAAAACTGATCCTTCTCGAGCAGATGTTGAATCCAGACAGCCATGTATTTCTACTAACCGGACATCAACTGATAGGCTTCCAAAATCTACAGAACCATCATCAAATGGGTTATCAGTAACAGGAGCTACGCACCAAGAGCAAGTTAGGCCTCTTCTTAGCTTGTTGGATAAAGAGCCCCCATCTGGCCGCTTTTCTGGACAGCTTGAGTATGTGCGTCAGTTTTCAGGATTAGAAAGACATGAAAGTGTACTCCCTTTGTTACATGCCACTGAAAAGAAAACAAATGGTGAACTAGACTTTTTGATGGCAGAATTTGCAGATGTTTCTCAACGTGGAAGGGAAAATGGAAATTTTGACTCTAGTGCTAGAGTTTCTCATAAAGTCACTCCCAAGAAATTAGGGACTTTGGGTTCCAGTGAAGGAGCTGCTTCCACATCTGGGATTGCATCACAGACAGCTTCAGGTGTACTGTCTGGTTCAGGTGTTCTAAATGCTAGACCAGGTAGTGCTACTTCGTCTGGACTACTTTCCCACATGGTTTCATCGCTGAATGCAGAAGTTGCCAGAGAGTATCTGGAGAAAGTGGCAGATCTTCTTCTTGAGTTTGCACAGGCAGACACCACTGTGAAATCTTATATGTGTAGCCAAAGCTTGCTCAGTCGTCTTTTCCAGATGTTTAATAGGGTGGAGCCTCCTATTTTGTTGAAGATACTGAAGTGTATTAATCATCTGTCAACCGATCCAAATTGCTTAGAAAATCTTCAGCGTGCTGAAGCAATAAAATACTTGATACCAAATCTTGAACTGAAAGAAGGATCTCTTGTATCAGAGATACATCACGAGGTCTTGAACGCACTATTCAATTTATGCAAGATAAATAAGAGGAGACAAGAACAAGCAGCTGAAAATGGAATCATTCCCCATTTGATGCAATTCATCACATCAAATTCTCCCTTGAAACAATATGCATTGCCTCTGCTATGTGACATGGCTCATGCATCTCGCAATTCAAGGGAGCAATTAAGGGCTCATGGCGGTTTGGATGTCTATTTGAATCTTCTTGAGGATGAGCTTTGGTCTGTGACAGCACTAGACTCTATTGCTGTTTGTTTAGCCCACGACAATGATAATAGGAAGGTTGAACAAGCACTGCTGAAAAAGGATGCAGTTCAGAAGCTTGTGAAGTTCTTCCAGGGCTGTCCAGAGCAACATTTTGTACACATATTGGAGCCATTCTTGAAAATCATCACAAAATCTGCAAGGATCAATACCACATTGGCTGTTAATGGATTAACACCACTTCTCATTGCAAGGCTAGATCATCAGGATGCTATAGCTCGTCTTAATTTACTCAGGCTAATAAAGGCCGTTTATGAGCATCACCCTCAGCCCAAGAAGTTGATTGTGGAGAATGATCTACCTGAAAAACTTCAAAACTTGATAGGGGAACGGAGAGATGGACAAGTGTTGGTTAAACAGATGGCTACTTCATTACTTAAAGCACTACACATAAACACCGTTTTGTAA 4161 0.4131 MSRQTTSSAFTKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMVYNNLNHKNIVKYLGSSKTKSHLHIVLEYVENGSLANNIKPNKFGPFPESLVALYIAQVLEGLVYLHEQGVIHRDIKENLLFFFFLNTNYINFCFQGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMAGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLLQCFKKDARQRPDAKTLLSHPWIQNFRRALQSSLRHSGTLRNIEDDSADAEVSGGYHKSAYENSSVEKEESAKEHTSVAADGSKAHEDNAADDVPPDQVLTLAIREKSFLQAGSNREVVNSESTGNHEISNAKDLHEVVKNGEVGSPQSRGMANKFGGKDNSVNNGNKSFAFGPRGQDNDFLKAMKMPTTVEGNELSRFSDPPGDAYLDDLFHPLDKQPGEVVAEASTSTSTSHMTKGYASAIDGGKNDLAKELRATIARKQWEKETEIGQANNGGNLLHRVMIGVLKDEVIDIDGLVFDEKLPGENLFPLQAVEFSKLVSSLKPEESEDVIVSACQKLIGIFHQRPEQKIVFVTQHGLLPLTDLLEVPKTHVICSVLQLINQIVKDNTDFLENACLVGLIPAVTSFAVPDRPREIRMEAAYFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQQSTPRNDFCRIAAKNGILLRLINTLYSLNESTRLASSSAGDGFSVDGSAQRPRSGILDPNHPSINQNETVLSSVDQQEPPKVRHAVPDHHLEPSSSNPRRSDANYPVDVDRPQSSNATADEKSSTQTSRESSASALKERGNMDRWKTDPSRADVESRQPCISTNRTSTDRLPKSTEPSSNGLSVTGATHQEQVRPLLSLLDKEPPSGRFSGQLEYVRQFSGLERHESVLPLLHATEKKTNGELDFLMAEFADVSQRGRENGNFDSSARVSHKVTPKKLGTLGSSEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNAEVAREYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRAEAIKYLIPNLELKEGSLVSEIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMQFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDELWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQGCPEQHFVHILEPFLKIITKSARINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLQNLIGERRDGQVLVKQMATSLLKALHINTVL 1386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00259 1386 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 1345 - -
Gma12g00259 1386 MobiDBLite consensus disorder prediction 372 421 - -
Gma12g00259 1386 SUPERFAMILY Protein kinase-like (PK-like) 17 281 IPR011009 -
Gma12g00259 1386 Gene3D - 1041 1383 IPR011989 -
Gma12g00259 1386 CDD STKc_Cdc7_like 19 280 - -
Gma12g00259 1386 SUPERFAMILY ARM repeat 1053 1379 IPR016024 -
Gma12g00259 1386 Pfam Protein kinase domain 21 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00259 1386 MobiDBLite consensus disorder prediction 768 920 - -
Gma12g00259 1386 ProSiteProfiles Protein kinase domain profile. 20 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00259 1386 Gene3D - 564 773 IPR011989 -
Gma12g00259 1386 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Gma12g00259 1386 Gene3D Transferase(Phosphotransferase) domain 1 1 284 - -
Gma12g00259 1386 MobiDBLite consensus disorder prediction 814 829 - -
Gma12g00259 1386 MobiDBLite consensus disorder prediction 869 886 - -
Gma12g00259 1386 MobiDBLite consensus disorder prediction 298 351 - -
Gma12g00259 1386 MobiDBLite consensus disorder prediction 830 868 - -
Gma12g00259 1386 MobiDBLite consensus disorder prediction 319 350 - -
Gma12g00259 1386 PANTHER MAP KINASE KINASE KINASE 2 1345 - -
Gma12g00259 1386 SUPERFAMILY ARM repeat 574 769 IPR016024 -
Gma12g00259 1386 SMART arm_5 1125 1169 IPR000225 GO:0005515
Gma12g00259 1386 SMART arm_5 603 643 IPR000225 GO:0005515
Gma12g00259 1386 SMART arm_5 1171 1210 IPR000225 GO:0005515
Gma12g00259 1386 MobiDBLite consensus disorder prediction 792 809 - -
Gma12g00259 1386 MobiDBLite consensus disorder prediction 889 920 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00259 Gma-Chr12 2028232 2050124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00259 1 1386 MAP Kinase Kinase Kinase AT3G13530 70.344 0.0 1928
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Gma12g00259 Pkinase 2e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00259 - - gmx:100803471 2657.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00259 12 2028232 2050124 Gma11g00935 11 7825305 7844554 GST