Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00225 ATGAGTCCCGTTTTCACATTCATTGCTGCTTTAAAGGGTGTTGTGACTCTCACCCGCGCCCTCATTTACGTGTTAGCACAATTATGCATTGGCTCAATAATTGGTTTCTTTATACTAAAGTGTGTCATGGACCCAAAATTAGCTTACACATATTCCTTGGGAGGTTGTGCCATCGATGGCCAAGGAGCGAATTCTGGTTTTAAGCCACAAGATGCTTTGTTAGTGGAATTCACTTGCACATTTGTGGTACTCTTTGGGGCGGTAACATTGGCATTTGACAAGAAAAGGTCTAGGGATTTGGGCTTGCTAATGGTGTGCTTACTGGTGGCAGGAGCCATGGCATTGGCAGCATTTGTGTCCATAACTTTAACTGGGCAGGCCAGTTATGCAGGTGTGGGCCTGAACCCAGCAAGATGCCTAGGCCCAGCATTGCTTCATGGAGGATCACTTTGGGAAGGGCATTGGGTTTTGTGGCTTGGGTCTTTCTTGGCATGTGTAGTCTATTATGCTGTGTCTATCAACCTTGCAAAGGAGGGTTTGGTTTGGGTAGATGGAGAATATGATATGTTGGCTCTCGGTTCTTGTGGGAATGTCTATAATACTTCCGTTTTAAAGGATCAACTAGAAGAACGAAGTGCTGGGTTCCAAGTCCAAGTATGA 660 0.453 MSPVFTFIAALKGVVTLTRALIYVLAQLCIGSIIGFFILKCVMDPKLAYTYSLGGCAIDGQGANSGFKPQDALLVEFTCTFVVLFGAVTLAFDKKRSRDLGLLMVCLLVAGAMALAAFVSITLTGQASYAGVGLNPARCLGPALLHGGSLWEGHWVLWLGSFLACVVYYAVSINLAKEGLVWVDGEYDMLALGSCGNVYNTSVLKDQLEERSAGFQVQV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00225 219 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 203 - -
Gma12g00225 219 Pfam Major intrinsic protein 3 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00225 219 PRINTS Major intrinsic protein family signature 20 39 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00225 219 PRINTS Major intrinsic protein family signature 75 93 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00225 219 PRINTS Major intrinsic protein family signature 116 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00225 219 PRINTS Major intrinsic protein family signature 155 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00225 219 SUPERFAMILY Aquaporin-like 2 167 IPR023271 -
Gma12g00225 219 Gene3D Glycerol uptake facilitator protein. 1 176 IPR023271 -
Gma12g00225 219 PANTHER AQUAPORIN-LIKE 1 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00225 Gma-Chr12 1762618 1763277 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00225 1 167 Major Intrinsic Protein MIP AT3G53420 30.814 1.27e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00225 K09866 - gmx:100794978 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00225 12 1762618 1763277 Gma12g00225 12 1762618 1763277 ECH
Gma12g00225 12 1762618 1763277 Gma11g00899 11 7567815 7568666 GST