Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00224 ATGGATGACCAATTTTCGACCGTTCATAGTCATAGTCGTGAGCCAATGCCTAGGGGCTTAGTTCATGAGAAGTCTTCAGAGCCCAAATTTCTTGCCTACATTGGTGCCCACGAATTTTTCACAATAGAGACGTGGAAAGCAGCTTTGGTAGAGTTAATTGCAACTGCTGCACTAATGTTCACCCTAACGAGTTGCAATATTGCATGTTTGGAGTCACAAGATGTCAATCCAAAGCTTATTCTTCCCTTTGCAGTCTTCATCATAGTATTCTTGTTTCTAATTGTGATAGTTCCTCTATCCGGGGGTCATATGAACCCTATTTTTACATTCATTGCGGCTTTAAAGGGTGTTGTGACCCTTTCTCGTGCTCTCCTTTACGTGTCAGCTCAATGCATTGGCTCAATAATTGGTTTCTTTGTACTCAAGAGTGTGATGGAGCCAAAATTAGCAGACACATATTCTTTGGGAGGTTGTGCCCTTGGTGACAAAGGACAAAGTTCTGGCCTAAGGCCACAAGATGCTTTGTTGTTGGAATTCTCTTGCACATTCTTAGTACTCTTTGTGGGTCTAACGTTGGCATTTGATAAGAAAAGGTGCAAGGAATTGGGCTTGCCAATGGTTTGTTTGGTGGTTGCAGCATCCTTGGCACTGGCAGTGTTTGTGTCCATAACTGTAACTGGCAGGCCTGGCTATGCAGGTGCTGGGCTGAGCCCTGCAAGATGCCTAGGTCCAGCGTTGCTTCATGGAGGCCCACTATGGAATGGGCATTGGGTTTTCTGGCTTGGGCCTTTCTTGGCCTGCATAATCTATTATAGTGTCTCCATTAATCTACCAAAGAAAGGTTTGAATTGGGTTGATGGAGAATATGATGTCTTAAGATTGGCTCTGGGTTCTTGTAGGACTATTTCTAATAATACGGATTTAAATGATCTTTCTTGA 939 0.4345 MDDQFSTVHSHSREPMPRGLVHEKSSEPKFLAYIGAHEFFTIETWKAALVELIATAALMFTLTSCNIACLESQDVNPKLILPFAVFIIVFLFLIVIVPLSGGHMNPIFTFIAALKGVVTLSRALLYVSAQCIGSIIGFFVLKSVMEPKLADTYSLGGCALGDKGQSSGLRPQDALLLEFSCTFLVLFVGLTLAFDKKRCKELGLPMVCLVVAASLALAVFVSITVTGRPGYAGAGLSPARCLGPALLHGGPLWNGHWVFWLGPFLACIIYYSVSINLPKKGLNWVDGEYDVLRLALGSCRTISNNTDLNDLS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00224 312 Gene3D Glycerol uptake facilitator protein. 30 277 IPR023271 -
Gma12g00224 312 PANTHER AQUAPORIN-LIKE 21 308 - -
Gma12g00224 312 MobiDBLite consensus disorder prediction 1 21 - -
Gma12g00224 312 SUPERFAMILY Aquaporin-like 42 269 IPR023271 -
Gma12g00224 312 PRINTS Major intrinsic protein family signature 46 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00224 312 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00224 312 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00224 312 PRINTS Major intrinsic protein family signature 177 195 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00224 312 PRINTS Major intrinsic protein family signature 218 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00224 312 PRINTS Major intrinsic protein family signature 257 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00224 312 Pfam Major intrinsic protein 41 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00224 312 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 21 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00224 Gma-Chr12 1760160 1761653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00224 17 269 Major Intrinsic Protein MIP AT2G37170 25.379 8.32e-22 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00224 K09866 - gmx:100797262 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00224 12 1760160 1761653 Gma12g00224 12 1760160 1761653 ECH
Gma12g00224 12 1760160 1761653 Gma11g00898 11 7564848 7565645 GST