Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00220 ATGATATTTGTACGCGGAAACAATTATAATGGCTTTGTCGCTTCTGGGACATTCTATGCGAAGTTTGTGGCGGAGGATTTGGTGAAAGACTACGAGGCTGGCCTTGAGTACGCCGTGGCTGAGGCGGTGCTTGCGAAAAGGGTCGCCGATGAAGGGACGCCGGAGTTTTTGGTTAAATGGGCCGATTTGGAGGAGCCCACGTGGGAGCCCGAGCTTGTCAAAGCCTTTGAGGAAACTAACAACCAGGCCCAGCCCAGTAATAATGGGCCTGCTGTGGTCGCTTCCAATCAGGATAGCCCTAGCCCGTGA 309 0.534 MIFVRGNNYNGFVASGTFYAKFVAEDLVKDYEAGLEYAVAEAVLAKRVADEGTPEFLVKWADLEEPTWEPELVKAFEETNNQAQPSNNGPAVVASNQDSPSP 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00220 102 SUPERFAMILY Chromo domain-like 36 79 IPR016197 -
Gma12g00220 102 Pfam Chromo (CHRromatin Organisation MOdifier) domain 40 71 IPR023780 -
Gma12g00220 102 MobiDBLite consensus disorder prediction 77 102 - -
Gma12g00220 102 SMART chromo_7 36 81 IPR000953 -
Gma12g00220 102 ProSiteProfiles Chromo and chromo shadow domain profile. 38 71 IPR000953 -
Gma12g00220 102 PANTHER HOMEOBOX PROTEIN WARIAI 20 83 - -
Gma12g00220 102 Gene3D - 30 79 - -
Gma12g00220 102 PANTHER SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC 20 83 IPR030300 GO:0009416|GO:0009507|GO:0045038|GO:0080085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00220 Gma-Chr12 1735506 1737418 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00220 K12271 - gmx:100818382 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00220 12 1735506 1737418 Gma11g00894 11 7538313 7540013 GST