Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00217 ATGATTAGTTCCAAAAAGATCATCCAAATGGCTTGGAAGTGGCAGAAAGAGGTGACAAATTACCAAATGAAGAGAATCCTATGGCCAAAGACTCAAGAAAATGTAGCAAAAGCAGAGAAGAAGGGTCACTTTGTTGTGTATAGCTCAGATAAGAGGCGCTTTGTGCTTCCTTTGCTGTATTTGAACAACAAAATCTTCAGGGAGCTTTTCAAATTGGCAGAAGAGGAGTTTGGTCTCTCTAGCAACGTGCCCCTAACGTTGCCATGTGAAGCCACGTTAATAGAGTACGTAATAACGTTGATCCAGAGAAACGTAACTAAGGATCTGGAGGAAGCTGTGTTAATGTTCGTAGCTACTAGTCGATGCCAATCGCATGTTGATCTTCATCGTGAACGAACCAATCAACATTTGCTTTGCAGCTATTAA 426 0.4131 MISSKKIIQMAWKWQKEVTNYQMKRILWPKTQENVAKAEKKGHFVVYSSDKRRFVLPLLYLNNKIFRELFKLAEEEFGLSSNVPLTLPCEATLIEYVITLIQRNVTKDLEEAVLMFVATSRCQSHVDLHRERTNQHLLCSY 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00217 141 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 141 IPR003676 GO:0009733
Gma12g00217 141 Pfam Auxin responsive protein 6 101 IPR003676 GO:0009733
Gma12g00217 141 PANTHER AUXIN-RESPONSIVE PROTEIN FAMILY, PUTATIVE-RELATED 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00217 Gma-Chr12 1710302 1710727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00217 6 103 Calmodulin-binding Proteins AT4G34750 33.333 2.42e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00217 - - gmx:100803097 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00217 12 1710302 1710727 Gma11g00891 11 7507591 7508016 GST