Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00216 ATGCATTCTTCAACAGCAAACAAGGGACACTTGCTTGTTTATATACCCCTTAAATATCTTAGCACAAACGTGTTCAGGGAGCTACTAAATTGGTACGAAGAGGAGTTTGGGTTACCTTCCAATGGACCTATTACGTTGCCTTGTGATAGCGTGTTATTGGACTACGTAATCTTGTTATTTCGAGAACACGTTCCTGAACAAGTTGAGAAGGCTTTGATCACTTCAATGGTTGCATGTCATCACGAGGCTTCATCATCATCATCTTCGCTTGCTCTTAGGCAGAGCAACGAGCCAATGATTATCTATGGCTTTTGA 315 0.4159 MHSSTANKGHLLVYIPLKYLSTNVFRELLNWYEEEFGLPSNGPITLPCDSVLLDYVILLFREHVPEQVEKALITSMVACHHEASSSSSSLALRQSNEPMIIYGF 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00216 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 2 104 - -
Gma12g00216 104 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 2 104 IPR003676 GO:0009733
Gma12g00216 104 Pfam Auxin responsive protein 15 58 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00216 Gma-Chr12 1707616 1707930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00216 8 57 Calmodulin-binding Proteins AT5G20810 38.983 2.09e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00216 - - gmx:100802572 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00216 12 1707616 1707930 Gma11g00890 11 7504561 7505206 GST