Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00214 ATGGCAACCATGGAAGACATGAACAACATGAGTGGTGAAATTACACTTCCAGGCTTCCGATTCCACCCAACTGAAGAAGAGCTTCTTGATTTCTACCTTAAAAACATGGTTGTTGGCAAGAAACTTCGTTACGATGTCATTGGTTTCCTCAACATCTATCAGCATGATCCATGGGACTTGCCTGGTTTGGCAAAGGTTGGGGAAAGAGAGTGGTACTTCTTCGTGCCAAGGGACAAAAAGCACGGAAGCGGAGGAAGGCCAAACCGCACAACTGAAAAAGGGTTCTGGAAAGCCACCGGTTCAGACCGGAAAATAGTGACCTTATCTGATCCAAAGCGCATAATTGGGTTAAGGAAGACACTGGTTTTCTATCAGGGAAGAGCTCCTAGGGGATGCAAGACCGATTGGGTCATGAATGAGTACCGTTTACCTGACAATTGCAAACTACCTAAGGAAATCGTGTTATGCAAGATATATCGAAAGGCAACTTCGTTGAAAGTGCTGGAGCAAAGGGCAGCACTAGAGGAAGAGAGAGAGATGAAGCAAATGGTTGGTTCCCCTGCTTCTCCTTCCTCCACGGACACCATGTCCTTTAGCAGCCCACAGGAAGAGCAAAACATGCCCTTGCCATTGTTGCAACATGTTCTTAAGAAAGAGTCTGAAACTGAAGACATGGTAGTGCCTAAACAAGAAAAAATAACCAACCAATTGGTCTTAAAAGACACCAACAAAAGCACTTGTGGCACATCACTACAAATGCCCTTTGGGAAGGAGAAGCTTCCAGACCTTCAGCTTCCCATGCTCTCGGATTGGACCCAAGATACCTTTTGGGCTCAGTTGAATAGTCCATGGCTCCAAAACTTTACTCCCACCAATATTCTAAACTTCTACTGA 894 0.453 MATMEDMNNMSGEITLPGFRFHPTEEELLDFYLKNMVVGKKLRYDVIGFLNIYQHDPWDLPGLAKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYQGRAPRGCKTDWVMNEYRLPDNCKLPKEIVLCKIYRKATSLKVLEQRAALEEEREMKQMVGSPASPSSTDTMSFSSPQEEQNMPLPLLQHVLKKESETEDMVVPKQEKITNQLVLKDTNKSTCGTSLQMPFGKEKLPDLQLPMLSDWTQDTFWAQLNSPWLQNFTPTNILNFY 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00214 297 ProSiteProfiles NAC domain profile. 15 161 IPR003441 GO:0003677|GO:0006355
Gma12g00214 297 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 9 296 - -
Gma12g00214 297 Gene3D NAC domain 24 165 IPR036093 GO:0003677|GO:0006355
Gma12g00214 297 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 296 - -
Gma12g00214 297 MobiDBLite consensus disorder prediction 178 204 - -
Gma12g00214 297 SUPERFAMILY NAC domain 14 161 IPR036093 GO:0003677|GO:0006355
Gma12g00214 297 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Gma12g00214 297 MobiDBLite consensus disorder prediction 185 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00214 Gma-Chr12 1685567 1687980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00214 10 297 NAC Transcription Factor Family AT2G17040 59.794 4.50e-116 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma12g00214 NAM 7.5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00214 - - gmx:732555 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00214 12 1685567 1687980 Gma12g00214 12 1685567 1687980 ECH
Gma12g00214 12 1685567 1687980 Gma11g00888 11 7484487 7486203 GST