Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00213 ATGCACCACTGCTTATACGACATAACCGGGAGCGACTTAGGGACGTTGAGATTGCTGACTCAGCTTCGGCCGAAACTGATAACGACCGTAGAGCAGGATCTGAGCCACGCAGGGAGCTTCCTGGCGCGGTTCGTGGAGGCATTGCATTATTACAGCGCGTTGTTCGACGCGCTGGGGGATGGGTTGGGTGAGGACAGCCTGGAGAGGCACACGGTGGAGCAGCATCTGTTGGGCTGCGAGATCAGGAACATCGTGGCAGTGGGAGGGCCCAAGAGGACCGGCGAGGTTAAGGTGGAGAGGTGGGGGGAAGAGTTGAAACGGGCCGGGTTTGGGCCAGTTTGGCTACGGGGCAACCCGGCCGCACAAGCGAATTTGTTGCTGGGAATGTTCCCTTGGAGAGGTTATACTCTTCTCCAAGAGAATGCCTCCCTCAAGCTTGCTTGGAAGGATTTCTCTCTCTTGATCGCCTCCGCTTGGCAACCCCAATATAAAAATATTTGTTTCATTCATTCCTCCCATTAG 522 0.5536 MHHCLYDITGSDLGTLRLLTQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGEDSLERHTVEQHLLGCEIRNIVAVGGPKRTGEVKVERWGEELKRAGFGPVWLRGNPAAQANLLLGMFPWRGYTLLQENASLKLAWKDFSLLIASAWQPQYKNICFIHSSH 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00213 173 ProSiteProfiles GRAS family profile. 1 160 IPR005202 -
Gma12g00213 173 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 161 IPR005202 -
Gma12g00213 173 PANTHER SCARECROW-LIKE PROTEIN 23 1 161 - -
Gma12g00213 173 Pfam GRAS domain family 14 160 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00213 Gma-Chr12 1679213 1679734 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00213 1 162 GRAS Transcription Factor Family AT5G41920 67.073 3.44e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma12g00213 GRAS 6.7e-42 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00213 - - gmx:100815217 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00213 12 1679213 1679734 Gma11g00887 11 7473466 7475356 GST