Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00212 ATGCTTCAAAGCTTGGTCCCGCGATCCCCTCGCACTTCAAACCCTAACGCTATGAAAACTAAGCGCCCCGTTGACGCCAGTGACCTTTCCCCCGCCGACGAGCCTTCCTTCAAGCGAACCAACTTCTCCGCCGACAGAACTGCAGCGGAAGCGGTGGAGGAGCAAGCCTTCGATCCCGAACCTCACGGCGGCGAGTCCACCGGTCTCAAACTCCTTGGTCTTCTCCTCCAATGCGCGGAGTGCATCGCCGTGGACAACCTCGACTTCGCCAACGACCTCCTCCCGGAGATCGCTGAGCTCTCGTCGCCGTACGGGACCTCGCCGGAGCGCGTCGGCGCGTACTTCGCACAGGCGCTGCAGGCGCGCGTGTTGAGCTCCTGCATCGGCTCCTGCATCCCCCACCGGTCGGCGACTCGCCGATTTCGCGAGCTCGCTCGGCCTTCCCTTCGAGTTCTTCCCGGTGGAAGGCAAAATCGGAAGCGTCACGGAACTGAGTCAACTCGGTGTTAG 510 0.6255 MLQSLVPRSPRTSNPNAMKTKRPVDASDLSPADEPSFKRTNFSADRTAAEAVEEQAFDPEPHGGESTGLKLLGLLLQCAECIAVDNLDFANDLLPEIAELSSPYGTSPERVGAYFAQALQARVLSSCIGSCIPHRSATRRFRELARPSLRVLPGGRQNRKRHGTESTRC 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00212 169 MobiDBLite consensus disorder prediction 1 64 - -
Gma12g00212 169 PANTHER SCARECROW-LIKE PROTEIN 23 18 136 - -
Gma12g00212 169 ProSiteProfiles GRAS family profile. 62 169 IPR005202 -
Gma12g00212 169 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 18 136 IPR005202 -
Gma12g00212 169 MobiDBLite consensus disorder prediction 1 20 - -
Gma12g00212 169 Pfam GRAS domain family 73 129 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00212 Gma-Chr12 1678675 1679184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00212 69 133 GRAS Transcription Factor Family AT5G41920 63.636 8.69e-20 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma12g00212 GRAS 2e-12 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00212 - - gmx:100815217 245.743