Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00167 ATGGATGCCCCCAAGGATCATCAAAATGTTGTAACCATAGATGTCCATGCTGCCAAAGATCTGCTCAATTCATCTGGTTATCGTTATCTGGATGTTAGGTCAGTTGAGGAATTCAACAAAAGCCATGTTGAGAATGCTCATAATGTCCCCTATGTCTTCATCACAGAAGCAGGACGGGTGAAAAATCCAGATTTTGTTGACCAGGTGGCAGCAATATGCAAGAATGAGGATCATTTGATTGTGGCTTGCAATAGTGGAGGAAGATCACTCCGAGCCTCCGTTGATCTGCTTGATTCAGGATTTAAGAATATTGTTAACATGGGGGGAGGCTACTCTGCGTGGGTGGATGCTGGATTTGCCGGGAACAAGCCAGGAGAAGACCTCAAAACTAGTTGCAAGTTCCGTCCTAATATCGCAAAACCCACTGCACAACCATAG 438 0.4498 MDAPKDHQNVVTIDVHAAKDLLNSSGYRYLDVRSVEEFNKSHVENAHNVPYVFITEAGRVKNPDFVDQVAAICKNEDHLIVACNSGGRSLRASVDLLDSGFKNIVNMGGGYSAWVDAGFAGNKPGEDLKTSCKFRPNIAKPTAQP 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00167 145 PANTHER PROTEIN HIGH ARSENIC CONTENT 1, MITOCHONDRIAL-RELATED 5 134 - -
Gma12g00167 145 Pfam Rhodanese-like domain 17 116 IPR001763 -
Gma12g00167 145 SMART rhod_4 13 120 IPR001763 -
Gma12g00167 145 Gene3D - 2 120 IPR036873 -
Gma12g00167 145 ProSiteProfiles Rhodanese domain profile. 23 123 IPR001763 -
Gma12g00167 145 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 8 119 IPR036873 -
Gma12g00167 145 CDD RHOD 18 115 - -
Gma12g00167 145 PANTHER THIOSULFATE SULFURTRANSFERASE 18 5 134 IPR044684 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00167 Gma-Chr12 1265826 1267791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00167 8 127 Sulfurtransferasese or Rhodanese AT5G66170 45.902 2.98e-35 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00167 K22547 - gmx:100794624 296.975