Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma12g00162 | ATGAGTGACAATTTGATGGGAAAAGTCAACGCTTTGGGGGAGCGTCTCAAAATTGGTGGGGCTGAGGTGGGTCGGAAGATGAGTGCTGGCATGAGTTCTGTGAGCTTCAAGGTCAAGGAATTTTTCCAAGATTCAGGCCATGCTGGTAAACTCGTTGGGGAAGCTACCTCTGAGGCCCTACATGAGCCTGATTGGGCTACAATTCTTCATATATGTGACTTGATCAATGCTGATCAACTTAACACTGCTGAATTGGTACGTGCAATTAAGAAAAGGGTCGTGGCCAAGAGTCCTAGAGGTCAGTATCTGGCTTTGGTTTTGCTTGAAGCGTTGGTCAAGAACTGTGACAAGGCTTTCTTGGAGGTGGCAACTGAGAGAGTCCTTGATGAGATGGTCAAGCTCATTGATGACCCTCAGACTATTCTTAATAACCGGAATAAGGCTTTGATAATGATTGAGGCATGGGGAGAGTCAACCATTGAGCTTCGCTATCTGCCTGTCTATGCAGAAACTTACAAGAGTTTGAAATCAAGGGGTATTCGATTCCCTGGCCGTGACAACGAAAGCTTGGCTCCTATATttactcctcctcactctgccattactccagaggctgatgtcagttttgcagatcttattcagtatgatattcatgggcaaagcttaacctctgttactcctcctcgttctgccactactccagaggctgatgtcagtcttgcacatcttatgccgcaagatattcatatgcaaagTTTTAAGTCTGAACAAATAAAGGAAACATTTGATGTCGCGAGAAATAGCATTGAGCTTCTTTCTACTGTGTTGTCTTCTACAATGCAGCAGAATGTGTTGAAGGATGAGTTGACCACCACATTAGTACAACAGTGCCGTCAGTCCCAGACTAGTGTCCATAGAATCGTTGAGACTGCTTGGGATAATGAATCAGTGCTTGTTGAGGCCTTGAATGTTAACGATGAGATTCAGAAGGTTTTCTCCAAATATGAAGAGCTGAAGAAGGAGCAGAAGGAGCCTACCGTTGTTCCATTTGAAGCTGAACCGGTTGTTACCAAAGAGGAAGCACTGATTAGGAAGCCTACTGCAGGTTCAAGAATTGGAGTCCATGGAGGGAGCCACGATGACATGTTGGATGATCTTGATGAGATGATTTTTGGGAAAAAGGGTAGGGATGATGCATTTGAAGGGGGGCAACATCCAAAGAAACAACAATCATCATCAAAAGATGACCTCATCTCCTTCTAA | 1263 | 0.3824 | MSDNLMGKVNALGERLKIGGAEVGRKMSAGMSSVSFKVKEFFQDSGHAGKLVGEATSEALHEPDWATILHICDLINADQLNTAELVRAIKKRVVAKSPRGQYLALVLLEALVKNCDKAFLEVATERVLDEMVKLIDDPQTILNNRNKALIMIEAWGESTIELRYLPVYAETYKSLKSRGIRFPGRDNESLAPIFTPPHSAITPEADVSFADLIQYDIHGQSLTSVTPPRSATTPEADVSLAHLMPQDIHMQSFKSEQIKETFDVARNSIELLSTVLSSTMQQNVLKDELTTTLVQQCRQSQTSVHRIVETAWDNESVLVEALNVNDEIQKVFSKYEELKKEQKEPTVVPFEAEPVVTKEEALIRKPTAGSRIGVHGGSHDDMLDDLDEMIFGKKGRDDAFEGGQHPKKQQSSSKDDLISF | 420 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma12g00162 | 420 | MobiDBLite | consensus disorder prediction | 394 | 420 | - | - | |
Gma12g00162 | 420 | Pfam | GAT domain | 266 | 340 | IPR004152 | GO:0035091|GO:0043130 | |
Gma12g00162 | 420 | CDD | GAT_GGA_like_plant | 261 | 338 | - | - | |
Gma12g00162 | 420 | SUPERFAMILY | GAT-like domain | 181 | 341 | - | - | |
Gma12g00162 | 420 | SUPERFAMILY | ENTH/VHS domain | 47 | 183 | IPR008942 | - | |
Gma12g00162 | 420 | Pfam | VHS domain | 50 | 179 | IPR002014 | GO:0035091|GO:0043130 | |
Gma12g00162 | 420 | Gene3D | - | 43 | 200 | IPR008942 | - | |
Gma12g00162 | 420 | PANTHER | TOM1-LIKE PROTEIN 1 | 225 | 420 | IPR044836 | GO:0035091|GO:0043130|GO:0043328 | |
Gma12g00162 | 420 | PANTHER | TOM1-LIKE PROTEIN 1 | 1 | 223 | IPR044836 | GO:0035091|GO:0043130|GO:0043328 | |
Gma12g00162 | 420 | PANTHER | TOM1-LIKE PROTEIN 1 | 225 | 420 | - | - | |
Gma12g00162 | 420 | CDD | VHS | 48 | 177 | - | - | |
Gma12g00162 | 420 | SMART | VHS_2 | 48 | 179 | IPR002014 | GO:0035091|GO:0043130 | |
Gma12g00162 | 420 | PANTHER | TOM1-LIKE PROTEIN 1 | 1 | 223 | - | - | |
Gma12g00162 | 420 | Gene3D | - | 249 | 347 | IPR038425 | - | |
Gma12g00162 | 420 | Coils | Coil | 321 | 341 | - | - | |
Gma12g00162 | 420 | MobiDBLite | consensus disorder prediction | 394 | 412 | - | - | |
Gma12g00162 | 420 | ProSiteProfiles | VHS domain profile. | 55 | 183 | IPR002014 | GO:0035091|GO:0043130 | |
Gma12g00162 | 420 | ProSiteProfiles | GAT domain profile. | 253 | 340 | IPR004152 | GO:0035091|GO:0043130 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma12g00162 | Gma-Chr12 | 1239650 | 1241913 | Wgd |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma12g00162 | - | - | gmx:100784925 | 811.986 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma12g00162 | 12 | 1239650 | 1241913 | Gma11g00986 | 11 | 8380631 | 8387240 | GST |