Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00162 ATGAGTGACAATTTGATGGGAAAAGTCAACGCTTTGGGGGAGCGTCTCAAAATTGGTGGGGCTGAGGTGGGTCGGAAGATGAGTGCTGGCATGAGTTCTGTGAGCTTCAAGGTCAAGGAATTTTTCCAAGATTCAGGCCATGCTGGTAAACTCGTTGGGGAAGCTACCTCTGAGGCCCTACATGAGCCTGATTGGGCTACAATTCTTCATATATGTGACTTGATCAATGCTGATCAACTTAACACTGCTGAATTGGTACGTGCAATTAAGAAAAGGGTCGTGGCCAAGAGTCCTAGAGGTCAGTATCTGGCTTTGGTTTTGCTTGAAGCGTTGGTCAAGAACTGTGACAAGGCTTTCTTGGAGGTGGCAACTGAGAGAGTCCTTGATGAGATGGTCAAGCTCATTGATGACCCTCAGACTATTCTTAATAACCGGAATAAGGCTTTGATAATGATTGAGGCATGGGGAGAGTCAACCATTGAGCTTCGCTATCTGCCTGTCTATGCAGAAACTTACAAGAGTTTGAAATCAAGGGGTATTCGATTCCCTGGCCGTGACAACGAAAGCTTGGCTCCTATATttactcctcctcactctgccattactccagaggctgatgtcagttttgcagatcttattcagtatgatattcatgggcaaagcttaacctctgttactcctcctcgttctgccactactccagaggctgatgtcagtcttgcacatcttatgccgcaagatattcatatgcaaagTTTTAAGTCTGAACAAATAAAGGAAACATTTGATGTCGCGAGAAATAGCATTGAGCTTCTTTCTACTGTGTTGTCTTCTACAATGCAGCAGAATGTGTTGAAGGATGAGTTGACCACCACATTAGTACAACAGTGCCGTCAGTCCCAGACTAGTGTCCATAGAATCGTTGAGACTGCTTGGGATAATGAATCAGTGCTTGTTGAGGCCTTGAATGTTAACGATGAGATTCAGAAGGTTTTCTCCAAATATGAAGAGCTGAAGAAGGAGCAGAAGGAGCCTACCGTTGTTCCATTTGAAGCTGAACCGGTTGTTACCAAAGAGGAAGCACTGATTAGGAAGCCTACTGCAGGTTCAAGAATTGGAGTCCATGGAGGGAGCCACGATGACATGTTGGATGATCTTGATGAGATGATTTTTGGGAAAAAGGGTAGGGATGATGCATTTGAAGGGGGGCAACATCCAAAGAAACAACAATCATCATCAAAAGATGACCTCATCTCCTTCTAA 1263 0.3824 MSDNLMGKVNALGERLKIGGAEVGRKMSAGMSSVSFKVKEFFQDSGHAGKLVGEATSEALHEPDWATILHICDLINADQLNTAELVRAIKKRVVAKSPRGQYLALVLLEALVKNCDKAFLEVATERVLDEMVKLIDDPQTILNNRNKALIMIEAWGESTIELRYLPVYAETYKSLKSRGIRFPGRDNESLAPIFTPPHSAITPEADVSFADLIQYDIHGQSLTSVTPPRSATTPEADVSLAHLMPQDIHMQSFKSEQIKETFDVARNSIELLSTVLSSTMQQNVLKDELTTTLVQQCRQSQTSVHRIVETAWDNESVLVEALNVNDEIQKVFSKYEELKKEQKEPTVVPFEAEPVVTKEEALIRKPTAGSRIGVHGGSHDDMLDDLDEMIFGKKGRDDAFEGGQHPKKQQSSSKDDLISF 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00162 420 MobiDBLite consensus disorder prediction 394 420 - -
Gma12g00162 420 Pfam GAT domain 266 340 IPR004152 GO:0035091|GO:0043130
Gma12g00162 420 CDD GAT_GGA_like_plant 261 338 - -
Gma12g00162 420 SUPERFAMILY GAT-like domain 181 341 - -
Gma12g00162 420 SUPERFAMILY ENTH/VHS domain 47 183 IPR008942 -
Gma12g00162 420 Pfam VHS domain 50 179 IPR002014 GO:0035091|GO:0043130
Gma12g00162 420 Gene3D - 43 200 IPR008942 -
Gma12g00162 420 PANTHER TOM1-LIKE PROTEIN 1 225 420 IPR044836 GO:0035091|GO:0043130|GO:0043328
Gma12g00162 420 PANTHER TOM1-LIKE PROTEIN 1 1 223 IPR044836 GO:0035091|GO:0043130|GO:0043328
Gma12g00162 420 PANTHER TOM1-LIKE PROTEIN 1 225 420 - -
Gma12g00162 420 CDD VHS 48 177 - -
Gma12g00162 420 SMART VHS_2 48 179 IPR002014 GO:0035091|GO:0043130
Gma12g00162 420 PANTHER TOM1-LIKE PROTEIN 1 1 223 - -
Gma12g00162 420 Gene3D - 249 347 IPR038425 -
Gma12g00162 420 Coils Coil 321 341 - -
Gma12g00162 420 MobiDBLite consensus disorder prediction 394 412 - -
Gma12g00162 420 ProSiteProfiles VHS domain profile. 55 183 IPR002014 GO:0035091|GO:0043130
Gma12g00162 420 ProSiteProfiles GAT domain profile. 253 340 IPR004152 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00162 Gma-Chr12 1239650 1241913 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00162 - - gmx:100784925 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00162 12 1239650 1241913 Gma11g00986 11 8380631 8387240 GST