Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00152 ATGGGAGGTTTCAATGGAGAAGAAGGTGTTGTGAGAGAAAAAGAAGAAGAAAACAAGTGGCCTTCATGGCTGCAGCCACTTCTCAAGACACGTTTCTTTGTTCAATGCAAAGTCCACGCAGATTCCCACAAGAGTGAATGCAATATGTATTGCTTGGACTGTGTGAATGGAGCCCTTTGCTCTGCATGTCTCGCTTCCCACAAAGAACACAGAATAATTCAGATAAGGAGGTCTTCGTACCATGATGTGATAAGGGTGTCTGAGATACAGAAATTTCTGGACATAACAGGGGTCCAAACTTACATTATAAACAGTGCCAAGATTGTGTTCTTAAATGAAAGGCCCCAACCTAGACCTGGAAAAGGGGTCACCAATACCTGCCAAGTCTGTGAACGCAGCCTCCTTGATTCCTTCAACTTCTGCTCTCTTGGTTGCAAGATTGTTGGAACCTCCAAAAAGTTCCGGAAGAAGAAAATGTTAGGTGAGGCAGATGGGTCTGATGGTGAAGAATCAGTAAATGGCATAATAAGCAATGCAAGTGCCAGAAACAAAATCCATAGCTTTACACCCTCAACACCACCACCAACAGTGGTTAATTACAGAACTGCCAAGAGGAGAAAAGGAATTCCACATAGAGCTCCAATGGGTGGAGAGCTTATTATAGAATACTAA 672 0.4315 MGGFNGEEGVVREKEEENKWPSWLQPLLKTRFFVQCKVHADSHKSECNMYCLDCVNGALCSACLASHKEHRIIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFNFCSLGCKIVGTSKKFRKKKMLGEADGSDGEESVNGIISNASARNKIHSFTPSTPPPTVVNYRTAKRRKGIPHRAPMGGELIIEY 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00152 223 Pfam PLATZ transcription factor 76 147 IPR006734 -
Gma12g00152 223 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 218 - -
Gma12g00152 223 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00152 Gma-Chr12 1160354 1162023 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gma12g00152 PLATZ 3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00152 - - gmx:100810757 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00152 12 1160354 1162023 Gma11g00994 11 8448574 8450085 GST