Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00142 ATGGTATCACTCAAATCTGGAAAGAAATTTGTCAAACATTCTATGATTCGGAACGCTGATATGAGACTCGAATCAGGGACTTGTAATGTGTGCTCAGCTGCTTGTTCATCTTGCATGCATCTTAACCAAGCTCTCATGGGGTCTAAGGCTGAAGAATTCTCTGATGAAAACTGTCGCTTAGGGGAGGCTAATCAGTATTGTGATGAGAGTGATAGATCTTCTCTTGGGAGCAGAGCTTGTGAAAGGTTGAAGCATGGTGTCAGTGAAACCAGTCACAGGCCTAGTGTTTCTTCCACTCAAGATTCTCTATCTGAAAATGCTGAGAACAGTCAAGCCTTATCAGAGAAGTATCAGGATTCCAAGTGTTTAGAAAGTCTAGATGATAGCACTTCATGTATCAGTAGGACCAGTAATGCTAATTTAGCGAGCAGTAGCTATCAAATAAATACAGACAAAATAAATATATCTTGTAGTTCAACTTCAGTTAGTCACTTAGTGGCAGAAGGATCTGGAAATGGGCCATCTGTTGACATGTCTAGTTTGTCAGAATGTTGTATGGAAAATGTTGACTCATCATTGACCAAAGAGAGAGTACCTATTATTGTTCCTGGCGAAAAATCTCTGGCAGATAAGGAAAACCTAAATAATGGTACAGCCAAGGTTTCTATAGAAATATGTCAAAAGTCAGAAGCAGATACTGAAAATAATTTTGATGTTGCTGAAGATGTTGATCTTAAATTTTCTGCCCATGATGGACTGCATGAGAAGGTTGAGGAGCTGGTTAAATCACCTGGCAGGGCTGAACCTCAATCGGAAGATGAGAGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTAGTAGGTGCAGTGATGGTGCAGAACACACCTACTGCATGCGGGAAATGCTTGAGAAGGTCCCTGAAGGGGACTGGTTATGTGAAGAATGCAAGTGTGCGGAGGAGACTGCAAATCAAAAGCTAGATATTGAAGAAAAAAAAAATCATGAAGTTCGTTCAACTTCACGAATTTCTGGCAAAAGACCTTCTCAAAGCATGGAAATAGCTACAGCAGCAAAAAGGCAAGCTCTTGGATCGAGCACAGGATCACCAAAGGCATCAAGCCCCAAGAGAATAGTCCCACTGTTGCGGGAATCTTCATTCAAGAGCATGGATAAAGGAAAGATGAAATCTGGTCAACAGATCCCCATGTGTAACCACCTCGGTGGCAATGACACAGAACTTGCCCGTTCTCTATCCACTGTCCCTCGGGGTCAAAATGCAAGGAGTACATTGCTGAAATCTAATTCATTCAACAACTTCAATTCCAAGCCAAGAGTCAAACTTGTTGATGAAGTTATTCCCCAAAAGCAGAAAGGGGGTGTTGAACATATTTCTAAGAATATGGAGACACCTGCTGGAATGATAAGCAAATCAATGTCATTCAAATCCTCGAATTTGGGTCGTTCAATTGCTGTTGAATCAAAAGTTAAAATGATGTCTTCTAAACCTGGAACTGCTCGGGATTTGAAAGCATCAAGACATACAAAAGATTCTGCTTCATTTGACAGGAAATTTCTGTCTAAGATTGATCGACCTGTCATTTGTTCAACCATGGTTAGTTCTGTTGTTTCCACATCAAAGGGTGATCAGAAGCTTACACCGCATGGCGAAACTGCTAAACCTTCTACAGTCAACAACAATCGAGAGTTTAAGGTCAACCAAGATGGAAAATTATATTCATCATCGAAATCTATCAATAATACAAGCAGTAAAAGTCCAGAACCTCAAGTTAGTTCAGATAGAACATCAACAAGTGTCGATGAAACTCAACAGGATAGGCTGCCTCGATCACAAGATACAGCTAATCAGGTTGACAAAACTAAAGATAGTTCTAGTGATCATGTGACATCAGGTGTTACTAATGCTTCAAAAAGCTCATTCTGTCGTAAATGTAAGGATTTTGGCCATGCTACAGAATGTTGTACAGTTAGTGGTACGCAGGAATTTGGTGCTGAATCATCAGTCATTGCCACAAGTAGTTCAAAAGATGAGATGCATGAGGGAAATAGATTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGAAGGCCTGAAATACACAAGAGGAAAGAAGCTCCTGACCAAACTAATGAGTTTCCTACATCAAGCACTGGTTTGAAACGAGAAGTCACTTCTCAAAAGCAAGTGTTGGTTTCCAGCACTTTGAAGAATGGTATATCTGCTGAAGAAAGCAATATGAAGCAGGAAATCATTGAGAATTCTACATTTGAAACCTCCAAATGTCCATCTGCCAATGATCTGAAACAACTTGAATTTTGTAGAACTGATGTTTGCTCTCAGCTGAGAAAGTCGGATTCTGCTGGTCCCACTTCTGGAAAGCCTGTAGTGAGAGACGACTTTCCCAATAATGCCATGGAAATATCAAGTATTCTTTCAAAGATGTCAGTCATTCCAGAATATGAGTGCATCTGGCAGGGTGTCTTTGTGGTGCATAGAAATGGAATGCCTCCTGACTTGTATACTGGAATTCAAGCACATTTATCTGCATGTGCTTCCCCTAAGGTTCATGAGGCAGTGAAGAAATTTTTACCTGAAGTTTCGCTAAATGAAGTTTCTCGTTTGAGCGTATGGCCTTCACAATTTCATCAAGGTGGTGCTAAGGAAGATAATATTGCTCTTTACTTCTTTGCCAGAGACATTGAAAGTTATGAGAGGTACTACAAGGGTCTATTGGATCACATGATTAGAAATGATTTAGCTCTTAGGGGGACTTTTGATGGTGTTGAACTTCTCATATTTGCATCTAATCAGCTTCTGGAAGATTCACAACGTTGGAATATGTTATTTTTCCTATGGGGTATATTCAGAGGGAGGAGGATCAATCACTTGGATTCCACAAAAAAGATATGTATTCCCAGTTTGAATGTGATGCCAAATGAGAAAGATTTTCGAACTGCTGTAATGACTTTGTCTGAAACTCAGTGTTCACCTAAGCACATGGATAAAGAGTCCATTGACCAAGGTCACAATATGGTTAGTAGGAATTTTGATGGCAAAGAAACTATTTTTGACCAGACACATTTGGGTTTACAAGTAAACTTAGAGAGACAAGACACTAGAATCAACACCAAATCTACATTAGGGATTCCGACCATCAGTACACAAATTTGTCAAGAAGTGAATTCCACTGGTTCGTCCCTGAGAGACAGTGTACCAAAGCATCGACAATACATAAAGTCTAAACCTCCTGAAGCAATGGGAACTAGTGTAAGTAGTAGGATTGTGGAAACAAAAACTAATCATGATATTTCTGTTAAGCAAGAGAACTCTTTGTCTTCGGGGATCCATTCCGTTGGTTGCCAAGAGATAGATACTGCAAGCAATATCAGTAAGGATAAAATTTTGGACAGAACAAACAATGGTGAGAATCAGCAAAGGCCTAAACGGAAACAGATGGAAGATGATCTCGATATTAACGTGGAGGCAACGTTTCAGAGAGACCTGACTGTGAAAGCCGTCAACTGTCAGCTACCTAATGATAAAAAAGTTAAGCATATAGATCTTTCAGATACAGTTGTGGAGGCTTCTGCAGTTAGTTGTCAGAAAATGCCTTGGAATGAGGTAAATGGCAAATTTGAAGACAGAGAAAGTTATAGCAGGGAGCTGCGAACAAGTTTTGGTGGAATTCACGGATGTTATGATTCTGGAGCCTGGGAATCTTTTAATGGTAGTTCTGCATCACTTGTAAATGATCTTGGTTCCTGTTCTTTAGGGGAGGACAAACGGTGTAAAGAACCTTGTGATGAGAAAATCATCCACGAGGACTTTGGAGCGATGGAAAGAACCTTCTTTCCTGTTGATACTCGTAAAAAAAATGACTTGGGGATGGTGCTGAATAGCGAGTCACTGAATGAACCTCGTGAGTACGTGGACCAAGTTCAAGTTGGGATTCCAAATCTAGAGCTTGGTTTGGGGGGTGAAACGAAACCCTCACACAAGGGTATGCTGCCTTTCTTTGTTGGTGCGGTTCACAAGAAAAATAACCAGGAAAAGATTCCAGAAATATTGACATACGAGCGAGAGGATGAGAACGTTGCTGCATCTCTTTCCCTGTCTCTATCTTTTCCATCTTCAAACAAGGAACCCGTCAAACCTGTTCCAAAAGCTGAGCCTTTGCCGGGTGGGCATAATCTCGGAAGTGATCCCGGAACAGGGAAAACAATAGTAATTAGTGTAGGAGCTGAACCTATTTTGCCAGTAGGTCTTTTTGCCATTCTGCATGGTAGAACTTTGAAAGGTACTCTTTTTGGAGGGCTAAAAGCCGTATCAGACCTTTCAATTGTAGCTGACAAATGCCAGAAAAAGGAATTTCCTCTTCAAGAACTCTTCACCCATGAAGTCACATTGGCCGATATAAACAAAGCATTTGAGCTAGTAAAACAACCCAATTGTGTCAAAGTTGTCATCAATATGTCATAG 4548 0.4057 MVSLKSGKKFVKHSMIRNADMRLESGTCNVCSAACSSCMHLNQALMGSKAEEFSDENCRLGEANQYCDESDRSSLGSRACERLKHGVSETSHRPSVSSTQDSLSENAENSQALSEKYQDSKCLESLDDSTSCISRTSNANLASSSYQINTDKINISCSSTSVSHLVAEGSGNGPSVDMSSLSECCMENVDSSLTKERVPIIVPGEKSLADKENLNNGTAKVSIEICQKSEADTENNFDVAEDVDLKFSAHDGLHEKVEELVKSPGRAEPQSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKCAEETANQKLDIEEKKNHEVRSTSRISGKRPSQSMEIATAAKRQALGSSTGSPKASSPKRIVPLLRESSFKSMDKGKMKSGQQIPMCNHLGGNDTELARSLSTVPRGQNARSTLLKSNSFNNFNSKPRVKLVDEVIPQKQKGGVEHISKNMETPAGMISKSMSFKSSNLGRSIAVESKVKMMSSKPGTARDLKASRHTKDSASFDRKFLSKIDRPVICSTMVSSVVSTSKGDQKLTPHGETAKPSTVNNNREFKVNQDGKLYSSSKSINNTSSKSPEPQVSSDRTSTSVDETQQDRLPRSQDTANQVDKTKDSSSDHVTSGVTNASKSSFCRKCKDFGHATECCTVSGTQEFGAESSVIATSSSKDEMHEGNRLKAAIQAALLRRPEIHKRKEAPDQTNEFPTSSTGLKREVTSQKQVLVSSTLKNGISAEESNMKQEIIENSTFETSKCPSANDLKQLEFCRTDVCSQLRKSDSAGPTSGKPVVRDDFPNNAMEISSILSKMSVIPEYECIWQGVFVVHRNGMPPDLYTGIQAHLSACASPKVHEAVKKFLPEVSLNEVSRLSVWPSQFHQGGAKEDNIALYFFARDIESYERYYKGLLDHMIRNDLALRGTFDGVELLIFASNQLLEDSQRWNMLFFLWGIFRGRRINHLDSTKKICIPSLNVMPNEKDFRTAVMTLSETQCSPKHMDKESIDQGHNMVSRNFDGKETIFDQTHLGLQVNLERQDTRINTKSTLGIPTISTQICQEVNSTGSSLRDSVPKHRQYIKSKPPEAMGTSVSSRIVETKTNHDISVKQENSLSSGIHSVGCQEIDTASNISKDKILDRTNNGENQQRPKRKQMEDDLDINVEATFQRDLTVKAVNCQLPNDKKVKHIDLSDTVVEASAVSCQKMPWNEVNGKFEDRESYSRELRTSFGGIHGCYDSGAWESFNGSSASLVNDLGSCSLGEDKRCKEPCDEKIIHEDFGAMERTFFPVDTRKKNDLGMVLNSESLNEPREYVDQVQVGIPNLELGLGGETKPSHKGMLPFFVGAVHKKNNQEKIPEILTYEREDENVAASLSLSLSFPSSNKEPVKPVPKAEPLPGGHNLGSDPGTGKTIVISVGAEPILPVGLFAILHGRTLKGTLFGGLKAVSDLSIVADKCQKKEFPLQELFTHEVTLADINKAFELVKQPNCVKVVINMS 1515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00142 1515 MobiDBLite consensus disorder prediction 360 390 - -
Gma12g00142 1515 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 212 349 IPR013083 -
Gma12g00142 1515 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 21 1180 - -
Gma12g00142 1515 SUPERFAMILY FYVE/PHD zinc finger 274 339 IPR011011 -
Gma12g00142 1515 MobiDBLite consensus disorder prediction 516 536 - -
Gma12g00142 1515 Gene3D - 1458 1510 - -
Gma12g00142 1515 Gene3D - 1425 1457 - -
Gma12g00142 1515 MobiDBLite consensus disorder prediction 1399 1424 - -
Gma12g00142 1515 MobiDBLite consensus disorder prediction 349 394 - -
Gma12g00142 1515 MobiDBLite consensus disorder prediction 559 638 - -
Gma12g00142 1515 SMART PHD_3 287 334 IPR001965 -
Gma12g00142 1515 ProSiteProfiles Zinc finger PHD-type profile. 285 336 IPR019787 -
Gma12g00142 1515 MobiDBLite consensus disorder prediction 90 116 - -
Gma12g00142 1515 MobiDBLite consensus disorder prediction 260 279 - -
Gma12g00142 1515 PANTHER - 21 1180 - -
Gma12g00142 1515 MobiDBLite consensus disorder prediction 559 657 - -
Gma12g00142 1515 PANTHER - 1181 1423 - -
Gma12g00142 1515 MobiDBLite consensus disorder prediction 85 116 - -
Gma12g00142 1515 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1181 1423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00142 Gma-Chr12 1091413 1100769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00142 284 371 C2H2 Transcription Factor Family AT3G01460 32.955 1.24e-07 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00142 - - gmx:100781187 2774.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00142 12 1091413 1100769 Gma11g01001 11 8494631 8502753 GST