Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00140 ATGAACATCAGTGGCGGAGGAGGAACTGTGATGGGTTTCAGTAGTAATGGGAGGTCCCCATTCACAGTGTCTCAGTGGCAGGAACTGGAGCACCAAGCTTTGATTTTCAAGTACATGGTTGCGGGTCTTCCTGTGCCTCCCGATCTCGTCCTCCCCATTCAGAAGAGCTTCGACTCTACTCTCTCTCACGCTTTCTTTCACCATCCCACACTGAGTTATTGTTCCTTCTATGGGAAGAAGGTGGACCCTGAGCCAGGACGATGCAGGAGGACTGATGGAAAAAAGTGGAGGTGCTCCAAGGAAGCATACCCAGACTCCAAGTACTGCGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTATGACTCACTTGTCTTCAACTGTCACATCACTCACTGTGACTGGTGGTGGTGACAGCAATGGAACTGTAAACTTCCAAAACCTTCCCACAAATGCCTTTGGTAATCTCCAGGGTACTGATTCTGGAACTGACCGCACGAATTATCATCTAGATTCCATTCCCTATGCGATTCCAAGTAAAGAATACAGGTGTCTTCAAGGACTTAAATCTGAGGGTGGTGAACACTGCTTCTTTTCTGAAGCTTCTGGAAGCAACAAGGTTCTCCAAATGGAGTCACAGCTGGAAAGCACATGGCCTTCTATGTCAACCAGAGTTGCCTCTTTTTCTACATCAAAATCAAGTACTGATTCCCTGTTGCATAGTGATTATCCCCAACATTCGTTTTTATCTGGTGAATATGCATCGGGAGAACACGCGAAGGAGGAGGGCCAGCCTCTTCGACCTTTTTCTAATGAATGGCCTAAAAGCAGGGAGTCATGGTCTGGTCTGGAAGATGATATATCCAACCAAACAGCCTTCTCCACAACTCAACTCTCAATATCCATTCCTATGTCTTCCGATTTCTCTGCAACGAGCTCTCAGTCCCCACATGATAATTAG 984 0.4736 MNISGGGGTVMGFSSNGRSPFTVSQWQELEHQALIFKYMVAGLPVPPDLVLPIQKSFDSTLSHAFFHHPTLSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMTHLSSTVTSLTVTGGGDSNGTVNFQNLPTNAFGNLQGTDSGTDRTNYHLDSIPYAIPSKEYRCLQGLKSEGGEHCFFSEASGSNKVLQMESQLESTWPSMSTRVASFSTSKSSTDSLLHSDYPQHSFLSGEYASGEHAKEEGQPLRPFSNEWPKSRESWSGLEDDISNQTAFSTTQLSISIPMSSDFSATSSQSPHDN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00140 327 PANTHER GROWTH-REGULATING FACTOR 5 17 319 - -
Gma12g00140 327 SMART QLQ_2 19 55 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gma12g00140 327 ProSiteProfiles WRC domain profile. 82 126 IPR014977 -
Gma12g00140 327 PANTHER - 17 319 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gma12g00140 327 MobiDBLite consensus disorder prediction 263 296 - -
Gma12g00140 327 MobiDBLite consensus disorder prediction 114 133 - -
Gma12g00140 327 ProSiteProfiles QLQ domain profile. 20 55 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gma12g00140 327 Pfam QLQ 20 54 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gma12g00140 327 Pfam WRC 83 125 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00140 Gma-Chr12 1070822 1074785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00140 1 125 GRF Transcription Factor Family AT3G13960 58.594 2.66e-50 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gma12g00140 WRC 1.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00140 - - gmx:100787226 641.728