Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00139 ATGGCACCTTCTCGGAGTGTCGCTGATTCAACGCCTCCGTCAACAACATCCGAAGTCGTAGAGAACGATTTTCAGCCATTCTTTGTTCTTCATAAAGCTTCGTCCCGGAGAAAAGATAGAAAACCAACAGCTCAGGGAAAATTGTGGAAGAGAAATGAGTTATCTTCATCATTTCCACAAGGTGCAAAGAAACTTGGAGGAAGAATGACTGAAGAATGTGATCACCATTTGTTTCAGCAACTGCAGATTGAAGCTTTTGACATTGTTTGGGCAAAGATTGAATCTACCATTAAGGATGTTTTAAGAGATCTCAATGCCATTGTATTTAATGATATACAAAAATGGGTTCTGGAGTGCTTCAACGCTACTAAGTTGCTTGGAGAACCTACTATTGCTGAAGCAACTCGGTCTTTTCCCACTCTAAATAATACTACTCCTGGGCAGATGTTCACTGCTTTCGTTTCTACCAGAAACATAGAGTTCGTTGATGATATATTGACATTTGAAGAGCTTGGTCACTTCCTGAAATCCCATGGATGCCATGTGGCTAAGCTTTCATCACTGGAGTTTTCATCAAAAAATGGGATTGCTGGTTGCTTGAAAGCCTTATTGCAAGAGTTTCTTGGGTGTGCTATTGATTCAGCTGATATATCAATCTTAGCATCATGGTATAGAGAACAAGTCAACTACAATAAACCACTGTTGCTGATCGTTAATGATTTGGAGAGATGTTGCGGATCAGTCTTAACTGATTTTATCTTGATGTTGAGTGAATGGGTTGTCAAGGTACCAATCATCTTCATATTTGGAGTTGCAACGACAGTGGATGCCTCCAGAAACATTCTGCCATCACATGCTCTTGAGCGTTTGTGTCCCTCTAGGTTTATGCTTGGAACACCAGTCGAGAGAATGGATGCAATTGTTGAGGCTGTTCTTCTGAAACATTGCACCACGTTTAGTATTGGTTATAAAGTGGCAGTCTTCCTAAGAAACTACTTCATCAACCAGGATGGGACAGTGACATCCTTTATTAGAGCTTTGAAGGTAGCTTGCTTATTACATTTCTCAATGGAACCTCTAAGTGTCATACATGGGCAAACACTCGCTGAAGATCAGAAAGAGGGAAAATCTGCACTATCACCCGAGACTCTCTTGAAATACATAGATGAACTTCCATTGTGTGCAAGGAATCAAACAGTTGATCATCCGACTCAAAAAAGCATGTCTGAGGGTTTGTCAGAATTGGTGACAGTGCAGAAGCTATGGAGCACTGCAGTTCTGTGCCTATATGAAGCTGGAAAGTACAGCAGAGTGCGACTATTGGATTTGTTTTGTGAAGCTCTCAGTCAAGATTTATACCTTTCAAGGGTTTCTGATTGTCATGTGGGGGATGAAAAAGATCGTGATTTGTCCTCAACAAATGATCCCAGACAACAATATTCCATCATGAAAAGCGGTGGTATTATTGGCAAAATAGTATGCAAAGTGAGGGATATCCCTACAGGGATGCTATATCAGTTGATTGAGAGTTGGGAAAAACTTACTGCTGATGTTTCAGAGATTCATGAGAAATTGAAAATCTTGCAATCTTCAGTAAGATGTGAAGATGGAAAGAGTTCACGCAAGAGTTCCAAGGACAATTCCAAGAGATATCCAGTAAACATTGACAAGGATGCGAGAATGTTAAATTTACAAGCTATCGCATTTTTAGATTATCTACTTAAAAATTTTTTGAAGCCCGTTGAAGGCATGCCTTTCCATGAAATTTTCTGCTTCAAGAATGTTGAGAAGCTTCAATTGGTTTTGATTGGAGATCCAAGAAGAAGAATTCAAGTTGATCTATTGGAGTTCCATAAGATTTTAAGGTGCAGCTGTTGTAGCAAGAGTGGCAATGCCCTATTGCCATCCAGGCATGACTCCTCAATTATGTATTCTCTGGCTCAAGAGCATGGAGATCTTATCAATCTTCATGACTGGTTCCAGTCTTTTAGAACAATTGTTATTCAACATAAAAATAAACGGAAACAAAATTCAAAGCAATCCCCCTCATCAAAGAAGAGAAAAGATATAAATGGATCTGCCGACCAAAACGAAGCATCGATTCAAGCACGCTTTTGTAGGGCAGTTACTGAGCTGCAGATCACTGGACTAGTTAGAATGCCCAGCAAGAGACGCCCGGATTTTGCTCAAAGAGTAGCATTTGGACTTTGA 2211 0.4007 MAPSRSVADSTPPSTTSEVVENDFQPFFVLHKASSRRKDRKPTAQGKLWKRNELSSSFPQGAKKLGGRMTEECDHHLFQQLQIEAFDIVWAKIESTIKDVLRDLNAIVFNDIQKWVLECFNATKLLGEPTIAEATRSFPTLNNTTPGQMFTAFVSTRNIEFVDDILTFEELGHFLKSHGCHVAKLSSLEFSSKNGIAGCLKALLQEFLGCAIDSADISILASWYREQVNYNKPLLLIVNDLERCCGSVLTDFILMLSEWVVKVPIIFIFGVATTVDASRNILPSHALERLCPSRFMLGTPVERMDAIVEAVLLKHCTTFSIGYKVAVFLRNYFINQDGTVTSFIRALKVACLLHFSMEPLSVIHGQTLAEDQKEGKSALSPETLLKYIDELPLCARNQTVDHPTQKSMSEGLSELVTVQKLWSTAVLCLYEAGKYSRVRLLDLFCEALSQDLYLSRVSDCHVGDEKDRDLSSTNDPRQQYSIMKSGGIIGKIVCKVRDIPTGMLYQLIESWEKLTADVSEIHEKLKILQSSVRCEDGKSSRKSSKDNSKRYPVNIDKDARMLNLQAIAFLDYLLKNFLKPVEGMPFHEIFCFKNVEKLQLVLIGDPRRRIQVDLLEFHKILRCSCCSKSGNALLPSRHDSSIMYSLAQEHGDLINLHDWFQSFRTIVIQHKNKRKQNSKQSPSSKKRKDINGSADQNEASIQARFCRAVTELQITGLVRMPSKRRPDFAQRVAFGL 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00139 736 MobiDBLite consensus disorder prediction 671 696 - -
Gma12g00139 736 Pfam Origin recognition complex winged helix C-terminal 607 734 IPR040855 -
Gma12g00139 736 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 16 735 - -
Gma12g00139 736 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 16 735 IPR020795 GO:0003677|GO:0005664|GO:0006260
Gma12g00139 736 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 75 363 IPR045667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00139 Gma-Chr12 1050024 1061812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00139 1 705 Core DNA Replication Machinery Family AT5G16690 45.897 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00139 K02605 - gmx:100780646 1436.01