Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00115 ATGGGACATCTCAGGTGGACACGTGAATCCGGCCGTGACCTTTGCAATGGCAGTGGGAGGCCACTGTATGCAGCCAGGGACCCTAGGCATGGTCCAATGAGTTCCACTGGCATACTTGTAGTTGGCTTAATGGCTGGGGCAAGTGTCTTGGCCACAGCTCCATTCTCCGGCGGCTCAATGAACCCTGCATGTGCTTTTGGCTCGGCAGCCATTGCAGGCAGTTTCAGGAACCAAGCAGTGTATTGGGTTGGACCCTTGATTGGTGCTACAATAGCTGGCCTTCTTTATGACAATGTGCTGTTCCGATCTCAACCCACAGATTCAATTCAAGGAATTGGCGTGTAA 345 0.5246 MGHLRWTRESGRDLCNGSGRPLYAARDPRHGPMSSTGILVVGLMAGASVLATAPFSGGSMNPACAFGSAAIAGSFRNQAVYWVGPLIGATIAGLLYDNVLFRSQPTDSIQGIGV 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00115 114 Pfam Major intrinsic protein 23 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00115 114 Gene3D Glycerol uptake facilitator protein. 22 111 IPR023271 -
Gma12g00115 114 PANTHER AQUAPORIN-8 22 109 IPR034294 -
Gma12g00115 114 SUPERFAMILY Aquaporin-like 23 105 IPR023271 -
Gma12g00115 114 PRINTS Major intrinsic protein family signature 42 64 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00115 114 PRINTS Major intrinsic protein family signature 79 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma12g00115 114 PANTHER AQUAPORIN TIP5-1-RELATED 22 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00115 Gma-Chr12 905572 906431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00115 22 100 Major Intrinsic Protein MIP AT3G47440 62.025 3.63e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00115 K09873 - gmx:100777983 186.422