Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00113 ATGCAAGGTGTGAGTCGTCAGCCAAAGTTATGGACTCAGGTTGACAGTACCAGCAGGGGTGTGCGTGTGCAAGGGATGAACTGGGATGATGACGAGCGCATACGCCTAATCAATCTTCTTAATGAATGTGTCAAGCTTACTGAATTAGGCAACTTCAATGCTGCAGATGTTGCATTCTACCATCTCTCTCACCTTGCTTCCCCTGATGGTGATTCAATGCAACGCGTTGCCACTTGTTTCATTGAGGCACTAGCCTATTGCCAAGTGGCCAAAAATTTGCGTGGTGTACCCAAAGTTCTCCATTTGGTAAAAACACTATCAACTCCTGAACAACAATTAGTCAAGAAGCTATTCTTTGATTTCTACCCCTTCATAAAGATAGCACACACCATCACAAATCAGACCATTATTGAAGCCTGCAAGGGGAAACAGCCATTAATGTCCTTGATCTCATGGACTAATCTCATCAAGTGTTTAAAACCAAGCACACCAACATGTCCGAAAATTACTATCACAGCCATACATGAGAAGAAGGAGGTGTTAGAGAAAATGGGGTTGCATCTTGGAGTTGAAGCTCAAAGGTTGCTTTTCCCTTTCCAATTCAATCCTGTTGTAAGCAGTTTGGAGAACCTTGACCCTGAGACATTGCCTATCAAGAAAGGTGAGCCTCTTGCTATTAGTTCTGTGCTTCAGCTTCACTCTCTTCTTGCCAGTGATGATGACGATGAGATGGCCAAAATGTAG 744 0.4355 MQGVSRQPKLWTQVDSTSRGVRVQGMNWDDDERIRLINLLNECVKLTELGNFNAADVAFYHLSHLASPDGDSMQRVATCFIEALAYCQVAKNLRGVPKVLHLVKTLSTPEQQLVKKLFFDFYPFIKIAHTITNQTIIEACKGKQPLMSLISWTNLIKCLKPSTPTCPKITITAIHEKKEVLEKMGLHLGVEAQRLLFPFQFNPVVSSLENLDPETLPIKKGEPLAISSVLQLHSLLASDDDDEMAKM 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00113 247 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 240 IPR005202 -
Gma12g00113 247 Pfam GRAS domain family 36 241 IPR005202 -
Gma12g00113 247 ProSiteProfiles GRAS family profile. 27 247 IPR005202 -
Gma12g00113 247 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 25 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00113 Gma-Chr12 895720 896766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00113 30 241 GRAS Transcription Factor Family AT1G50420 41.629 1.79e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma12g00113 GRAS 1.5e-35 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00113 - - gsj:114380243 327.02