Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00100 atgatggggtacctctacctttcttgcagagccgaatccgctgtctcaacctccaattcggtgtcctcttccaaagagaaaagcagcagcatcaagatccaagagtttctgtacagtgacctcgaagctgccaccaatggcttctccgaccgcaagctcctcggtaaagggagccacggctacgtctacaaggccgtcgttcgcggccgtcccgtggcggtgaagcgtccatcgcggccacagcatcatcataacaatgttccccaacgacctgtctcttgttcttcttcctctgcaccctccgaggtcgacaacgagatcgacatcttGTCCAAAATCCAGAGCCCCAGGTTGGTCAATCTGGTCGGGTTCACCAATGATTCAAGAGACAGGCTTTTGGTGGTTGAGTTCATGAGCAATGGCACCCTCTACGATGTTCTTCATTCCTCTCCAAGGCCTCCCAATTGGGGTAGGAGGATTCGTTTGGCTTTGCAGACTGCAAAAGCTATTGACACTCTTCACTCCTCAACCCCTCCTGTGATTCACCGTGATATCAAGTCTGCTAATGTTCTCATCGACCGCAGCTACAATGCAAGGTTAGGTGATTTTGGTTTGGCCTTAAGAGGCCATGTTGATGATTACAGACTCAGGTCTACTCCTcctgctggcaccatgggctatcttgatccttgttatgtcactcctgataatttaagcaccaaaactgatgtttttagttttgggattttgttgttggagattataagtggaaggaagGCTATTGATATCACTTATTCACCTCCTTCCATTGTGGATTGGGCTATTCCTCTTATTAAGAAAGGGAAATTGTTGGCTGTTTATGATCCTAGAATAGCACCCCCCAAGGATCCGATTGTGAGGAAGCAGTTGGCTGTGATTGCTGCCAAGTGTGTGAGGTCTTGTAGGGAGAGAAGGCCCTCTATGAAGGAGCTTGTTACTTGGCTTTGTGGGTTGTGTAAATTGGTGCCTCTTCATTCGTGGAATGGTTTTAACAACCCTTGCATGATGGCTGAGATTGCAGGGCGCCCAGTGGAAGCGGCGGCGGCGGCGGCAAGGAATTATGGTCAATTCAGTTCTAGGCTGGAAGGTGTGGAGGAAGGAAAGTTTGATGCTTTGGATGGCAGGTTGTCAAAGTCTGCAATGAGGTATTCTAGgagggtgtactctgatttggggttcagcagcaacttgatggacttgatggctaccactgaggagcccgaatttcttagagatgcggatggggtggaacatagttctaagtcagctgaacaagtttctggtagctccagcaggtttgggagtggaagatattccataAGAGGGAGGAATCTGTACCGGCCTTGTTGGAGCGACAAGGATGCATTAGGCTTGAGTAAAGGccagattttaggtcagagtgagactacttcgaaacaggatggggtttctggttccaattcgaagaatttgaattctgttgctgctgaggttatctag 1518 0.2569 MMGYLYLSCRAESAVSTSNSVSSSKEKSSSIKIQEFLYSDLEAATNGFSDRKLLGKGSHGYVYKAVVRGRPVAVKRPSRPQHHHNNVPQRPVSCSSSSAPSEVDNEIDILSKIQSPRLVNLVGFTNDSRDRLLVVEFMSNGTLYDVLHSSPRPPNWGRRIRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRSYNARLGDFGLALRGHVDDYRLRSTPPAGTMGYLDPCYVTPDNLSTKTDVFSFGILLLEIISGRKAIDITYSPPSIVDWAIPLIKKGKLLAVYDPRIAPPKDPIVRKQLAVIAAKCVRSCRERRPSMKELVTWLCGLCKLVPLHSWNGFNNPCMMAEIAGRPVEAAAAAARNYGQFSSRLEGVEEGKFDALDGRLSKSAMRYSRRVYSDLGFSSNLMDLMATTEEPEFLRDADGVEHSSKSAEQVSGSSSRFGSGRYSIRGRNLYRPCWSDKDALGLSKGQILGQSETTSKQDGVSGSNSKNLNSVAAEVI 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00100 505 MobiDBLite consensus disorder prediction 84 100 - -
Gma12g00100 505 Gene3D Phosphorylase Kinase; domain 1 18 137 - -
Gma12g00100 505 MobiDBLite consensus disorder prediction 427 446 - -
Gma12g00100 505 SUPERFAMILY Protein kinase-like (PK-like) 20 328 IPR011009 -
Gma12g00100 505 ProSitePatterns Protein kinases ATP-binding region signature. 54 75 IPR017441 GO:0005524
Gma12g00100 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Gma12g00100 505 ProSiteProfiles Protein kinase domain profile. 48 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00100 505 PANTHER OS01G0750732 PROTEIN 1 469 - -
Gma12g00100 505 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 1 469 - -
Gma12g00100 505 Pfam Protein kinase domain 49 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00100 505 MobiDBLite consensus disorder prediction 479 505 - -
Gma12g00100 505 MobiDBLite consensus disorder prediction 75 100 - -
Gma12g00100 505 SMART serkin_6 48 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00100 505 Gene3D Transferase(Phosphotransferase) domain 1 138 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00100 Gma-Chr12 763364 765475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00100 36 328 Receptor kinase-like Gene Family AT3G59420 43.813 3.27e-73 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gma12g00100 Pkinase 6.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00100 - - gmx:100819674 940.258