Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00085 ATGGACATTGATGATGATTTCACATTTTGTCAGGTCAGTGCACCTGTTGATGTTGAAACAAACAAGCTTGCTTCAGATATAGCTGATATTTCCATTAAAGAAGAATCTTCAAATGCATCTAATACTGCTCAGGATAATGCTTTACCCAATCAGAAGGAGGCTACCGTTGGTTCTTTGTCTTTCACTGTAACTAGCACAGCTTCTAGTCGGCCAAATGAATCCACCACAAAATTAGTACCAACTCAGGCTAACATTTCGTCTCTAAAGTCACCGGCACAGAAGAATTCCGTTAAGAAGCCAACGGTTCGGGCCAAAGTTCCTTTTGAGAAAGGCTACAGTCAAATGGACTGGCTCAAGCTCACCCAAACACATCCTGACCTTGCAGGTCTGAAAGGGCAGTCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAAAACACCAGACAGAGGGCCAAATGTGGACTGTATTAAAAGGCCGTGTTTATAATATATCTCCATACATGAAGTTTCACCCTGGAGGTGTTGATATGTTGATGAAGGCGGTGGGAAAAGATTGCACATCTTTATTCAATAAATACCATGCTTGGGTTAATGCTGAATTCTTATTGGAAAAATGCTTTGTGGGTACCTTAGATGAAGGTCAGTGA 648 0.409 MDIDDDFTFCQVSAPVDVETNKLASDIADISIKEESSNASNTAQDNALPNQKEATVGSLSFTVTSTASSRPNESTTKLVPTQANISSLKSPAQKNSVKKPTVRAKVPFEKGYSQMDWLKLTQTHPDLAGLKGQSNKRLISMDEVRKHQTEGQMWTVLKGRVYNISPYMKFHPGGVDMLMKAVGKDCTSLFNKYHAWVNAEFLLEKCFVGTLDEGQ 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00085 215 Pfam Cytochrome b5-like Heme/Steroid binding domain 141 211 IPR001199 -
Gma12g00085 215 SMART Cyt_b5_2 139 212 IPR001199 -
Gma12g00085 215 Gene3D - 133 214 IPR036400 -
Gma12g00085 215 PRINTS Cytochrome B5 signature 161 171 IPR001199 -
Gma12g00085 215 PRINTS Cytochrome B5 signature 171 185 IPR001199 -
Gma12g00085 215 PRINTS Cytochrome B5 signature 199 211 IPR001199 -
Gma12g00085 215 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 136 214 IPR036400 -
Gma12g00085 215 PANTHER CYTOCHROME B5 DOMAIN-CONTAINING PROTEIN RLF 16 206 - -
Gma12g00085 215 PANTHER FERREDOXIN 16 206 - -
Gma12g00085 215 MobiDBLite consensus disorder prediction 62 101 - -
Gma12g00085 215 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 167 174 IPR018506 GO:0020037
Gma12g00085 215 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 136 212 IPR001199 -
Gma12g00085 215 MobiDBLite consensus disorder prediction 62 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00085 Gma-Chr12 665443 669421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00085 137 213 NADPH P450 reductases AT1G26340 42.857 1.41e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00085 - - gmx:100806129 434.106