Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00078 ATGGCAATAGCGATTACGCAATGTTCAGAAAAGCTAGGCTACCTTATACTTCAATTAGGCAAAAATTTCCTTGTGTTCATGGCCATGGTGGTTGCATGCAATGGTGCACATTTCCTACTAAAGCCTTATTCACAACCTCGCGTTGCTTCTGACATAATGGTAGGACTAATTATGGGGAACATACCTTTTTTACGTGAACTATATGAAGAATTCAACAAGACCTTTGGATTTATCATTGATTTTGGCATGATGTGTTACATGTTTGCTTTGGGTATAGAGATGGATCCTTACATGCTCTTCAAGAGACCAACAAAGGATGCTCAAGTTGCTTATGCAGCAATATTGTGCACTTTCATCATATGCTGTTCCATGACACCACTCTTCCGTTACTTCACACACCAACATGGATTAGCATTCACCCTCTCCCTCTCTGCTCTTGTCTCCAGCACGGCGTCTCCCGTTCTCACGCGTCTAATAACCAGCCTCAAAATAGGAAAATCAGACATTGGAAGCCTTGTCATAGGTGCCGGGATGCACTCGGATTTCCTCTGCTCATTGCTTCTTTCAGTTGGCTACATTTTCATGCCATCGGATGCTTATTGCATTGGCACTAAAAAAGACAAGACTCTGCTGACCATCATCACAGTGAGCATTGTAATTGTAGCACAGACAATGTTCACAGCGGTGGTTTCGCCAGTATTTATGGCATGGGTGAACAATGAAAACCCTGAAGGGAAACCCATGAAAGGATCACACCTGATACTGTCAATTGCCTTCGTGGTAATGATTTGTGCCTCCTCAACTCTATACGACTATAGTCCGGTTCTAAGTGCGTTTATGACAGGGATATGTTTACCCAGGGAGGGTAGAGTTTCCAAATGGGTTGTCAGCAAAATCAACTCTCTCTTGACAACCATCTTCTTTCCCGTCTTCTTCTTGTGGATGGGGTATGTGGCTGATATCACCAAATTCGACCCTGGAGACCCTACAACGTGGCTAAGAGTGATTTTACCCATTGCCATAGTGGTCGTGGGTAAAGTTGTTGGCACACTTGTTGCTGGGGCACTGCTTGGCTTTCACTGGCCAGAATCAATTGCAATCGGATTGCTCCTTATCACCAAGGGCCATTTTCAAATCTACATGGCTATCAAAGGGCTGAGTTGTGGCACCGCCACTACTTCCTCCTCCGGCATTATTTCGGTAATTACAATATTTTTAACATTGGTGCATGCCCCCATAGTCGTGGCACAAATCATCAAACGTGCCAGGAAAAGGGCACCTACTCACAGCAACGCCCTCCAATTACTGGACCCATTAAGTGAGCTAAGGATATTCTTGTGCCTTCACGGACTTGATAATGTTCCTGCTTCCATCAACTTCATGGAGATCTCAAGGGGGTCAGCAGACTCTGGTATTCTGGTATATGTTGCAGAAATTATTGAATTAACTGATCAAATAGCAGCAACAATGGAGAGTGGTGAAGGAGTGCATACAACAACTATAAAAGACAAGGAAGTGACAGAGATAAGAGAACAAGTAACCAGCTCCTTTCAAGCCTATGTAGATAGAGATGGCGATGGGATTACATTCAAAAGATCACTGGCAGTGTCAACAATCACTAACATGGCAAAGAATATCTGCGTCTTAGCAGAGGACTTGATGATTGCCCTCATCATACTTCCATTCCACAGGAAACAGCGTCAGGATGGAAAACTGGATGGTGGCAATCCAGGCTTCAGATACGTGAACCGGAAGTTATTGAAGAGTGCTCCTTGTTCCGTGGGGATTCTAGTGAACAGAGGTTTCGGATCCATCGAGAAAATATCAAGGTTTGAGGCATTGCTCAAAGTGGCAGTAATATTCATTGGTGGAAAAGATGATAGAGAAGCACTTGCCTATGTGGGTCGTGTAGCATGGCATCCGGGAGTAAAAGTGATAGTAATAAGATTCCTGGTAGATACCAATGAAGAATCTTCAAGACTGGCAGCGCATAGGGTAACCCTTACAGAGCAAGAGGAGGAGATGGGGTTGGATGATGAATGCTTTGCACAGTTCTATGAAAGGTATATAGTTGGAGGTCGCATTTCCTATATGGAGAAGCATCTTGCAAATGCATCTGAGACCTTCTCTACTCTGAGATCATTTGAAGGACAATACTCACTGGTCATTGTAGGAAGAGAAGGTGGAGCAAACTCTATATTGACAAAGGGGATGAATGACTGGCAACAGTGCCCAGAACTGGGACCAATAGGGGATGTTCTTTCAGGACCAGACTTCTCAACGTCAGTATCTGTGTTAATAATCCAACAACACAAACTTAGGGGAGAATTAGATGGACTTGACGAGGAATTCTCTATCATGTAG 2364 0.4391 MAIAITQCSEKLGYLILQLGKNFLVFMAMVVACNGAHFLLKPYSQPRVASDIMVGLIMGNIPFLRELYEEFNKTFGFIIDFGMMCYMFALGIEMDPYMLFKRPTKDAQVAYAAILCTFIICCSMTPLFRYFTHQHGLAFTLSLSALVSSTASPVLTRLITSLKIGKSDIGSLVIGAGMHSDFLCSLLLSVGYIFMPSDAYCIGTKKDKTLLTIITVSIVIVAQTMFTAVVSPVFMAWVNNENPEGKPMKGSHLILSIAFVVMICASSTLYDYSPVLSAFMTGICLPREGRVSKWVVSKINSLLTTIFFPVFFLWMGYVADITKFDPGDPTTWLRVILPIAIVVVGKVVGTLVAGALLGFHWPESIAIGLLLITKGHFQIYMAIKGLSCGTATTSSSGIISVITIFLTLVHAPIVVAQIIKRARKRAPTHSNALQLLDPLSELRIFLCLHGLDNVPASINFMEISRGSADSGILVYVAEIIELTDQIAATMESGEGVHTTTIKDKEVTEIREQVTSSFQAYVDRDGDGITFKRSLAVSTITNMAKNICVLAEDLMIALIILPFHRKQRQDGKLDGGNPGFRYVNRKLLKSAPCSVGILVNRGFGSIEKISRFEALLKVAVIFIGGKDDREALAYVGRVAWHPGVKVIVIRFLVDTNEESSRLAAHRVTLTEQEEEMGLDDECFAQFYERYIVGGRISYMEKHLANASETFSTLRSFEGQYSLVIVGREGGANSILTKGMNDWQQCPELGPIGDVLSGPDFSTSVSVLIIQQHKLRGELDGLDEEFSIM 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00078 787 Pfam Sodium/hydrogen exchanger family 26 414 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gma12g00078 787 PANTHER CATION/H + ANTIPORTER 4 785 - -
Gma12g00078 787 PANTHER CATION/H+ EXCHANGER 3 4 785 - -
Gma12g00078 787 Gene3D - 21 428 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00078 Gma-Chr12 597270 600455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00078 24 787 Antiporter Super Family AT3G52080 48.972 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00078 - - gmx:100815945 1503.8