Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00065 ATGGTTTCCCACACTCTTCATCAACCCACCGCAGGCATCGTCAAGCAACTTCGACTCGAGAACTTCATGTGCCATTCCAAACACGAGACCGAGTTCGGAAACCACGTCAATTTCATCACCGGTCAAAACGGAAGTGGTAAGAGTACAATCCTAGCTGCACTGTGTGTTGCATTTGGCTGTCGAGCCAAAGAGACTCAAAGGACTTCCACTTTGAAGGATTTCATTAAAACTGGCGCCACTGATGCTGTCATCCAAGTTGAAATTCAAAATGAAGGGGAGGGTGCTTTTAAACCTGAAATATATGGTCCTGTTATCATCGTAGAACGTAGGATATCTGAATCAACAAGTTCTGCTACATTAAAAGACCACCAAGGTATGAAGGTTGTCAGTTGGAAAACAGATCTTCTAGAAATCGTTGAACATTTTAATATTGATGTGGAGAATCCATGTGTAATTATGAGTCAAGACAAAAGCAGAGAATTTTTGCATTCTGGGAATAACAAAGATAAATTTAAGTTCTTTTACAAGGTCACGCTTCTTCAGCAAGTCAATGATCTTCTGGAAAGCATTTCCCACAGAGGGGCATTTTATGGTAGCGGTTTTGGTGACTCTCAGGATGCAGTAAGCCGAAAAATCAGCTTGGACCCTCTAGTTGATTTTGCTGAGGCACATGGATCACAGCGGATATTCATCACTCCACATGATACTAGTTCGGTGAGGGCAGGGGACAGGATAAAGAAGGTGCAAATAGCCGCTCCACGTTCTTGA 768 0.4284 MVSHTLHQPTAGIVKQLRLENFMCHSKHETEFGNHVNFITGQNGSGKSTILAALCVAFGCRAKETQRTSTLKDFIKTGATDAVIQVEIQNEGEGAFKPEIYGPVIIVERRISESTSSATLKDHQGMKVVSWKTDLLEIVEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKVTLLQQVNDLLESISHRGAFYGSGFGDSQDAVSRKISLDPLVDFAEAHGSQRIFITPHDTSSVRAGDRIKKVQIAAPRS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00065 255 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B 205 255 IPR027132 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Gma12g00065 255 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B 10 191 IPR027132 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Gma12g00065 255 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 205 255 - -
Gma12g00065 255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 188 IPR027417 -
Gma12g00065 255 CDD ABC_SMC6_euk 14 255 - -
Gma12g00065 255 Gene3D - 13 195 IPR027417 -
Gma12g00065 255 Pfam AAA domain 16 163 IPR038729 GO:0140664
Gma12g00065 255 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 10 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00065 Gma-Chr12 488004 491115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00065 206 255 Structural Maintenance of Chromosomes family AT5G07660 68.000 3.71e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00065 K22804 - gmx:100811664 405.986