Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00042 ATGTCGTCCACCACTCCTCCGCTGAAACCCGACCAATGCGATCCCGTGCCGGGGACACCGTCATCGCCCGCCGGCAGAGGTAAGCTCCAGAAGATTCCGCCGATTCCGATTCGACGGAGTAAGGTATCATCATCATCAACAACAACACACGCAGGCAATGTCGACGAAGGGCAAGAGGAAGATTCTTCTTCCATCTTGCTCGCCTCGTCTCTTGGTCTCAATCACATTCGAACGCGTTCTTCATCCTTTCCTCTTCGCTATTCCTCCTCCCTTGGTGCACCTTCCTTCTTGACACAGGATGCTGTCACTGTTAATGACGCCAGACTTAGATCCAAATCTAATAATTCCCATCCAAGAAAAGTCCTAGGGGGAAAAGTTCATTTGGGTAAATCCAAAACGTTGAGACCTCATTCGCAACTCATTCCCGGGCTAGAGGGTCATCATGCAGCTTTCACCAAAGAAATGCAATCCCCACGTTTTCAGGAAATCCTGCGACTTACCAGTGGACGCAAAAAGAGAAACCCTGATATTAAAAGTTTTTCCCATGAACTCAACTCCAAAGGAGTTAGACCATTTCCAATCTGGAAACATCGTGCCTTTGGCCACATGGAGGAAGTCATGGCGGCAATCAGATTTAAGTTTGAAAAACTAAAGGAAGAAGTTGACTCTGACTTGGGTGGTTTTGCTGGAGATTTGGTGGGCATTCTTGAAAAGAATTTAGTGTCTGATCGTGAATGGAAAGAGAGGTTGGAGGATCTGTTGGTTGTTACTCAACAATGTGCAAAGATGACTCCTACCCAGTTTTGGATCAAATGTGAATCTATTGTTCAAAACCTAGATGACAAACGTCAAGAATTACCAGTGGGGATACTCAAGCAAACTCATACACGCCTACTGTTTATTCTCACTCGTTGCACTCGCCTAGTGCAGTTCCAGAAGGAAAGCGGATATGAACAAGATCACATTCTAGGTCTTCACCAATTCAGCGATCTTGGGGTTTATCCTGAGCAAATTTTCAAGGCTGTACAGCAGAAATCCAGTATTCCATCTGCTGGACATGAGATGCCTGAGAAACAGTTAAAAATGTCACATGGTAAAGAGAAAGACAAACCAATAACAGAACAAAGTCAAGCTGACCAACACGTAAGTGTTGCAATTGACAATGGAGAGGTTGCTACAGCCAAAAGTATCGAATCAACTCCTGGAACATATAAGATGTCTTCTTGGAGAAAGCTTCCATCTGCTGGTGAGAAAAAGCGAAAAGATCAAGATGCTGTAGATTTCCCATCCAAAGGTGAACTGGATCACTTGCTAGTCAAAGACGAAAATTGTGAAAATTTGGATACTTTGTCATGTCATCCTGAACATTCACAATCATCATCAAGAGCACGAAAGGTTTCTTGGGGATTCTGGGGAGATCAGCAAAATCTAACATACGAGGATTCAATGATATGCAGGATTTGTGAGGTTGAAATACCAATTGTACACGTGGAGGAGCATTCTAGAATATGCACAATTGCTGATAGATGTGATTTGAAAGGCTTAACTGTAAATGAACGGCTTGAAAGAGTTTCTGAAACCATTGAAAGGATACTGGAATCCTGGacaccaaaaagcacaccaaaaagcacTGATACTTCTGGAGAAAGCTTTGAGCTTGCTGCAGTGTCAACATCAAGTGTGCATGAAGAGTTCAATGATTTATCTCTAGAGAGAAATAACCTGACTTGTAGATGCTCTGAAGACATGCTTGACTCTGGTGTGGAGCCTGACAATACTTTTGCCATGGAGGATCTGAACCTTTCATCTGGAATATCATGTGAAGCACACATCTGCTTAAAAACTGATCATGGAACAAAGTTATCTTCCGCTGGAAGCTTGACACCCAGATCACCATTGATAACACCACGAACCACACAGATAGAAATTTTATTAAGTGGGCGAAGAACACTATCTGAACTTGAAAGTTGTGACCAGATAAGCAAGCTAGTTGAAATAGCCCGTGCTGTTGCAAATGTGAACAACTGTGACTACAGAGCTCTGGAGTATATGCTTGATCGCTTAGAAGACCTGAAATATGCCATTCAAGACAGAAAAGTGGATGCACTTATTGTGGAGACTTTTGGACGACGAATAGAGAAACTTTTGCAGGAGAAATATCTCTCACTCTGTGGGCAGATAGAAGATGAAAAGGTGGACTCATCAACTAGTATGGCTGATGAAGAGAGTTCAGTGGAAGATGATACAGTTCGTAGCCTTCGTGCTAGCCCTATTAATGCTTGCTCCAAGGACAGAACCTCTATCGAAGACTTTGAAATAATAAAACCAATAAGTAGGGGCGCATTTGGACGAGTTTTTCTTGCCCGAAAAAGAGCAACTGGGGATTTATTTGCTATAAAGGTTCTGAAAAAGGCAGATATGATCCGTAAAAATGCAGTTCAAAGTATTTTGGCAGAGCGAGATATCCTTATATCTGTTCGAAACCCTTTTGTGGTCCGATTTTTCTACTCTTTCACATGTAGGGAAAATCTTTATCTAGTTATGGAGTATTTGAATGGTGGAGATCTTTATTCTATTCTGAGAAATCTAGGTTGCTTAGATGAAGATATGGCTCGTGTATATATTGCAGAAGTTGTTCTTGCATTGGAGTATTTGCATTCCTTAAATGTGATTCACAGAGACTTGAAGCCAGATAACTTACTGATTGGTCAAGATGGTCATATTAAGTTGACAGATTTTGGGCTCTCCAAGGTTGGTCTTATCAACAGCACAGATGATTTATCAGCGCCATCATTTTCCGATAATGGTTTCCTAGGAGATGATGAACCAAAATCTCGACATTCTTCAAAAAGGGAAGAACGCCAAAAACAATCAGTAGTTGGCACCCCGGATTATTTGGCACCTGAAATACTTCTTGGCATGGGACATGGTGCAACAGCAGATTGGTGGTCCGTGGGTGTCATACTTTATGAGCttcttgtgggtattccaccatttaatgcagaacatccacagCAAATTTTTGATAACATAATTAACAGAGACATACAATGGCCCAAGATTCCTGAGGAGATCAGCTTTGAAGCATATGATTTGATAAATAAATTATTGAATGAAAATCCAGTCCAAAGATTAGGTGCAACGGGAGCTACAGAAGTTAAACGCCACGCTTTCTTCAAGGATATTAATTGGGATACCCTAGCAAGGCAGAAGGCTATGTTCATTCCAATGGCTGAAGCTCTTGATACAAGTTATTTCATGAGCCGGTACATTTGGAATCCCGAGGATGAACATTGTCTTGGAGGTAGTGATTTTGATGAGATTACTGAAACATGCAGCAGTGGTTCAGGCAGCGATTTATTAGATGAAGATGGTGATGAATGTGGTAGTTTAGCAGAGTTCAGCGGTCCACCTCTTGAAGTGCAGTACTCATTTAGTAATTTCTCATTTAAGAACTTGTCTCAGCTAGCTTCTATCAATTATGATCTGGTGATTAAGAGCTCCAAGGAATCAACTCAATGA 3522 0.4097 MSSTTPPLKPDQCDPVPGTPSSPAGRGKLQKIPPIPIRRSKVSSSSTTTHAGNVDEGQEEDSSSILLASSLGLNHIRTRSSSFPLRYSSSLGAPSFLTQDAVTVNDARLRSKSNNSHPRKVLGGKVHLGKSKTLRPHSQLIPGLEGHHAAFTKEMQSPRFQEILRLTSGRKKRNPDIKSFSHELNSKGVRPFPIWKHRAFGHMEEVMAAIRFKFEKLKEEVDSDLGGFAGDLVGILEKNLVSDREWKERLEDLLVVTQQCAKMTPTQFWIKCESIVQNLDDKRQELPVGILKQTHTRLLFILTRCTRLVQFQKESGYEQDHILGLHQFSDLGVYPEQIFKAVQQKSSIPSAGHEMPEKQLKMSHGKEKDKPITEQSQADQHVSVAIDNGEVATAKSIESTPGTYKMSSWRKLPSAGEKKRKDQDAVDFPSKGELDHLLVKDENCENLDTLSCHPEHSQSSSRARKVSWGFWGDQQNLTYEDSMICRICEVEIPIVHVEEHSRICTIADRCDLKGLTVNERLERVSETIERILESWTPKSTPKSTDTSGESFELAAVSTSSVHEEFNDLSLERNNLTCRCSEDMLDSGVEPDNTFAMEDLNLSSGISCEAHICLKTDHGTKLSSAGSLTPRSPLITPRTTQIEILLSGRRTLSELESCDQISKLVEIARAVANVNNCDYRALEYMLDRLEDLKYAIQDRKVDALIVETFGRRIEKLLQEKYLSLCGQIEDEKVDSSTSMADEESSVEDDTVRSLRASPINACSKDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSILRNLGCLDEDMARVYIAEVVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAPSFSDNGFLGDDEPKSRHSSKREERQKQSVVGTPDYLAPEILLGMGHGATADWWSVGVILYELLVGIPPFNAEHPQQIFDNIINRDIQWPKIPEEISFEAYDLINKLLNENPVQRLGATGATEVKRHAFFKDINWDTLARQKAMFIPMAEALDTSYFMSRYIWNPEDEHCLGGSDFDEITETCSSGSGSDLLDEDGDECGSLAEFSGPPLEVQYSFSNFSFKNLSQLASINYDLVIKSSKESTQ 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00042 1173 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 25 1172 - -
Gma12g00042 1173 MobiDBLite consensus disorder prediction 412 427 - -
Gma12g00042 1173 Pfam Protein kinase domain 771 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00042 1173 ProSitePatterns Serine/Threonine protein kinases active-site signature. 890 902 IPR008271 GO:0004672|GO:0006468
Gma12g00042 1173 MobiDBLite consensus disorder prediction 932 959 - -
Gma12g00042 1173 MobiDBLite consensus disorder prediction 939 958 - -
Gma12g00042 1173 SMART serkin_6 771 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00042 1173 ProSiteProfiles AGC-kinase C-terminal domain profile. 1060 1160 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gma12g00042 1173 CDD STKc_MAST_like 777 1064 - -
Gma12g00042 1173 MobiDBLite consensus disorder prediction 397 427 - -
Gma12g00042 1173 Gene3D Transferase(Phosphotransferase) domain 1 855 1077 - -
Gma12g00042 1173 ProSiteProfiles Protein kinase domain profile. 771 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g00042 1173 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 1172 - -
Gma12g00042 1173 MobiDBLite consensus disorder prediction 39 61 - -
Gma12g00042 1173 SUPERFAMILY Protein kinase-like (PK-like) 768 1088 IPR011009 -
Gma12g00042 1173 MobiDBLite consensus disorder prediction 1 61 - -
Gma12g00042 1173 Gene3D Phosphorylase Kinase; domain 1 769 1086 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00042 Gma-Chr12 322348 330107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00042 29 1173 AGC Kinase Gene Family AT5G62310 63.675 0.0 1438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Gma12g00042 Pkinase 2.2e-65 CL0016