Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00037 ATGTGGATGACCCGGCCCATAGCTTCCGCCGTCCCCCAACTTGAGAACTGCATTCTGCTTCCGATACTCAAACTCACATGTATCTGTCTCTATCAATATCATCACGATTCCTCGAGCAAATCCATAAGATTAGAATCACCCTTTCCTCTAAGAACGTCAAGAATCTCGAGAAGGGACAAGCATCTCAGGGTGAAGGGACCTGTTAGGATGCCAACTAAAGTTCTTAACATCACCACCAGAAAATCCCCCTGTGGTGAAGGCACCAACACATGGGACAGATTTGAGCTGCGTGTACACAAAAGAGTCATTGACCTCTACAGTTCCCCTGATGTGGTTAAGCAGATAACCTCGATCACAATTGAACCTGGTGTCGAGGTTGAGGTGACCATTGCAGATGCTTGA 402 0.4701 MWMTRPIASAVPQLENCILLPILKLTCICLYQYHHDSSSKSIRLESPFPLRTSRISRRDKHLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00037 133 Pfam Ribosomal protein S10p/S20e 59 129 IPR027486 -
Gma12g00037 133 PRINTS Ribosomal protein S10 family signature 90 104 IPR001848 GO:0003735|GO:0005840|GO:0006412
Gma12g00037 133 PRINTS Ribosomal protein S10 family signature 68 83 IPR001848 GO:0003735|GO:0005840|GO:0006412
Gma12g00037 133 PANTHER RIBOSOMAL PROTEIN S10-RELATED 57 132 - -
Gma12g00037 133 Hamap 30S ribosomal protein S10 [rpsJ]. 37 130 IPR001848 GO:0003735|GO:0005840|GO:0006412
Gma12g00037 133 Gene3D Ribosomal protein S10 domain 52 133 IPR036838 -
Gma12g00037 133 SMART Ribosomal_S10_2 41 129 IPR027486 -
Gma12g00037 133 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 57 132 IPR001848 GO:0003735|GO:0005840|GO:0006412
Gma12g00037 133 TIGRFAM uS10_euk_arch: ribosomal protein uS10 59 130 IPR005729 GO:0003735|GO:0006412|GO:0015935
Gma12g00037 133 SUPERFAMILY Ribosomal protein S10 58 130 IPR036838 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00037 Gma-Chr12 288250 289156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00037 58 133 Cytoplasmic Ribosomal Protein Gene Family AT3G47370 92.105 1.42e-47 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00037 K02969 - gmx:100500017 155.221