Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02559 ATGGCCTTCTGTAATAAGGTTGGAAATGTCTTGAGGCAGGGTGCTGCTCGCAGCACACAAGCACCTGTTTCATCCATGCTTAATTACATTCGCTGCATGTCTTCAAGCAAGCTTTTTATTGGAGGCCTTTCATATGGAGTTGACGATCAGTCTCTTAAGGATGCATTTTCTGGCTTTGGAGATGTGGTTGATGCAAAAGTTATAACTGACAGAGACTCTGGAAGATCAAGGGGATTTGGATTTGTCAACTTCTCCAATGATGAGTCTGCAAGTTCGGCACTCTCTGCAATGGATGGGAAGGATCTAGATGGGCGAAGCATTAGGGTATCCTATGCAAATGATAGACCTTCTGGACCTCAATCTGGCGGCGGCGGCGGTGGTGGTTATCGCAGTGGGGGTTTTGGCGGCGGGTGGTGA 417 0.4796 MAFCNKVGNVLRQGAARSTQAPVSSMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLDGRSIRVSYANDRPSGPQSGGGGGGGYRSGGFGGGW 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02559 138 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 108 IPR000504 GO:0003723
Gma11g02559 138 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3 MITOCHONDRIAL 1 136 - -
Gma11g02559 138 Gene3D - 23 138 IPR012677 -
Gma11g02559 138 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Gma11g02559 138 SMART rrm1_1 37 110 IPR000504 GO:0003723
Gma11g02559 138 SUPERFAMILY RNA-binding domain, RBD 30 137 IPR035979 GO:0003676
Gma11g02559 138 MobiDBLite consensus disorder prediction 107 138 - -
Gma11g02559 138 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02559 Gma-Chr11 40636452 40638635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02559 35 124 Eukaryotic Initiation Factors Gene Family AT4G34110 38.889 8.31e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02559 - - gmx:100527220 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00022 18 172174 174881 Gma11g02559 11 40636452 40638635 GST