Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02531 ATGGCAGGTTTGGAGTACAGCATCGATGATCTGTTTCAAGAAGCTAAGAGGAGATGGCTCAAGCCTGTGGAAGCTCTTTACATTCTACGGAATCACGACCAGTGCAAGTTCACCCACCAGCCCCCTCATCAGCCAGCTGGTGGATCCCTGTTTCTGTTTAATCGTAGAATCATGCGTTCCTTCCGTAAAGATGGTCATAACTGGCGGAAGAAAAAAGATGGCAAAACTGTGGGAGAAGCGCATGAACGGCTTAAGGTTGGCAATGTTGAAATCCTAAACTGTTACTATGCACATGGAGAGGAGAACCGTACTTTTCAGAGACGGAGCTATTGGATGTTGGAGCCGGAATATGATCATATTGTTCTTGTGCATTATAGAGAAACAAGTGAGGGGAAATCCAATTCTGAGCATGTCACACAATTGCCATCAGGTTCCTCTCCTGCTTTTAGTCAGAGTCATAGCTCGTATACTGCTCACAACCCAGGAACAGCATCCATGATTGGTGATTCATGTGAACCTAATCAGAATTTTTCTTTTCCTGGGTCTTTAGAAGTTACGTTCGAAGCACAAGCCTTGCGCCAATTGGAAGAACAGCTGAGTTTGAATGATGATGGCTTCAATGAAATTGCACTTGATTTAGTGTCAGGTCAAGATCAAAGGGTGGTTTATAAGCAAGATAAATCTGCAGCTTTGTCTGGACCAAATGATCTAGGACAACCTTGTGATGGATATAATGGAAGACAAGatgacagtggcacatattatcatgattttcttgatgattgtcctggtggaaatgaaaaaactatatactggacgaaagtgctggaatcgtgtaagcccttatctgtgaccaaattaccagatcaacatgcatatgaggcgattggaaatgaaaatacattattttcttcgggaaggggagtgattgccaacctggaaaacaatcagtggctaaactccaacagtaataatattgaaaactatggtggggtcaaatttccaccatattctctagcagaaactccaggagctaactctgactactatgaaacattttttgaccaattccaaaatcaaggacctctgggtgtagattcaagcttgactgttgtgcagaaacagaaatttaccattagggcagtatccccagaatactgttattctaccgagactacaaaggtgatcattattgggtcatttctctgccatgactcggattctacctgggcctgtatgtttggtgatgttgaagttcctgcagagataattcaggacggcataatctgttgtgaagctccatCCAATCATCTTGGAAAGGTTAATTTGTGCATTACTTCAGGAAATAGGGTGCCATGCAGCGAAATGAGGGAGTTTGAGTTTCGAAATAAGACTACTAGTTGCACTCGCTGTAATTCATTGGAAACAGAAGGAAGCAAAAGTCCTGAAGATCTGTTATTACTTGTTCGATTTGCAGAGATGCTCCTTTCTTCTTCAACTACAAAGGATGACAGAATAGAATCTGGAAGTCATCTTTCAACAGAACAGAAAGATGATGATGATTCGTGGAGCCATATTATAGACACTCTTCTAGATAGCACTAGAACACCATCTGATGCTGTTAAATGGCTTCTTGAAGAGCTGCTGAAGGATAAGTTGCAGCTCTGGCTTTCTAACCGAAGAGATGAAGGGACGGGCTGTTCTTTGTCCAAGAAAGAGCAGGGGATAATACACATGGTTTCTGGGTTGGGTTTTGAGTGGGCCTTGAACCCCATTCTCAGTTGTGGTGTGAATATAAATTTCCGTGACATCAATGGATGGACCGCTCTTCATTGGGCTGCACGGTTTGGGAGGGAAAAAATGGTTGCTTCACTTATAGCTTCTGGTGCATCTGCTGGAGCAGTGACAGATCCAAGTTCACAAGATCCAACCGGTAAAACTGCTGCATCTATTGCAGCCAGCCATGACCATAAGGGTCTGGCAGGTTATCTTTCAGAGGTAGACCTAACAAGCCATCTGTCGTCCCTCACATTGGAAGAGAGTGAGCTTTCTAGAGAATCTTCTGAGCTTGAAGCTGAGTTAACTGTCAGTAGTGTCTCTGAAGAAAATCTTGTGGCCAGTGAGGATCAGGTTTCACTAAAAGCTTCCTTGGATGCTGTTAGAAATGCAGCTCAGGCAGCTGCACGGATACAAGCTGCTTTTCGTGCACATTCTTTTAGAAAACGGAAAGAAAGAGATGCTGCCGCCACAGTTCTAGATGGATATTGTATTGATGCAGGTAGCATTGATAATAACATTTCAGTGCTTTCTGCCATGTCAAAACTTAGTTCTCAGAGCTGGCGTGATTACAAAGCTGCTTTGTCGATTCAGAAGAAATATCGAAATTGGAAAGGTCGTATAGAATTCTTAGCATTGCGCCAGAAAATAGTTAAGATACAGGTAACTGTAATAGAAGTTGTTATTACAGTTTTGCTATACCAATTGAATTCCAAGAGTTCTCTAATATTATGGGCAGTAGGAATCTTGGACAAGGTTGTGTTACGATGGCGCAGAAAACGAATTGGTATACAAAGTGTCCGGCAAGAAATGGAGTCAAATGAAGAAGAAAGTGATGATGCAGATTTTCTCAATGTGTTCCGGAAAGAGAAACTAAATGCAGCAATTGAAAAGGCCTTGAAGCGGGTGCTTTCCATGGTCCACTCCACTGGTGCTCGTCAACAATATAGACGCTTGCTTTCGTTGTATCGTCAAGCCAAGATTGAACATGGGAGCACAAGTGATGAAGCACCGTTATCAACTTCGGAAGAGAATGCTTCCAATATGGAAGATGATGATTTGTGTCAATTTTTGGACACCTTCTTCTGGCCTTCCTAG 2874 0.3455 MAGLEYSIDDLFQEAKRRWLKPVEALYILRNHDQCKFTHQPPHQPAGGSLFLFNRRIMRSFRKDGHNWRKKKDGKTVGEAHERLKVGNVEILNCYYAHGEENRTFQRRSYWMLEPEYDHIVLVHYRETSEGKSNSEHVTQLPSGSSPAFSQSHSSYTAHNPGTASMIGDSCEPNQNFSFPGSLEVTFEAQALRQLEEQLSLNDDGFNEIALDLVSGQDQRVVYKQDKSAALSGPNDLGQPCDGYNGRQDDSGTYYHDFLDDCPGGNEKTIYWTKVLESCKPLSVTKLPDQHAYEAIGNENTLFSSGRGVIANLENNQWLNSNSNNIENYGGVKFPPYSLAETPGANSDYYETFFDQFQNQGPLGVDSSLTVVQKQKFTIRAVSPEYCYSTETTKVIIIGSFLCHDSDSTWACMFGDVEVPAEIIQDGIICCEAPSNHLGKVNLCITSGNRVPCSEMREFEFRNKTTSCTRCNSLETEGSKSPEDLLLLVRFAEMLLSSSTTKDDRIESGSHLSTEQKDDDDSWSHIIDTLLDSTRTPSDAVKWLLEELLKDKLQLWLSNRRDEGTGCSLSKKEQGIIHMVSGLGFEWALNPILSCGVNINFRDINGWTALHWAARFGREKMVASLIASGASAGAVTDPSSQDPTGKTAASIAASHDHKGLAGYLSEVDLTSHLSSLTLEESELSRESSELEAELTVSSVSEENLVASEDQVSLKASLDAVRNAAQAAARIQAAFRAHSFRKRKERDAAATVLDGYCIDAGSIDNNISVLSAMSKLSSQSWRDYKAALSIQKKYRNWKGRIEFLALRQKIVKIQVTVIEVVITVLLYQLNSKSSLILWAVGILDKVVLRWRRKRIGIQSVRQEMESNEEESDDADFLNVFRKEKLNAAIEKALKRVLSMVHSTGARQQYRRLLSLYRQAKIEHGSTSDEAPLSTSEENASNMEDDDLCQFLDTFFWPS 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02531 957 Gene3D - 491 670 IPR036770 -
Gma11g02531 957 Pfam Ankyrin repeats (3 copies) 588 665 IPR002110 GO:0005515
Gma11g02531 957 SUPERFAMILY Ankyrin repeat 575 666 IPR036770 -
Gma11g02531 957 Pfam CG-1 domain 14 127 IPR005559 GO:0003677
Gma11g02531 957 MobiDBLite consensus disorder prediction 131 171 - -
Gma11g02531 957 SUPERFAMILY E set domains 378 462 IPR014756 -
Gma11g02531 957 Coils Coil 673 693 - -
Gma11g02531 957 MobiDBLite consensus disorder prediction 134 171 - -
Gma11g02531 957 SMART ANK_2a 644 673 IPR002110 GO:0005515
Gma11g02531 957 SMART ANK_2a 605 634 IPR002110 GO:0005515
Gma11g02531 957 PANTHER CALMODULIN-BINDING PROTEIN 3 953 - -
Gma11g02531 957 Pfam IPT/TIG domain 378 449 IPR002909 -
Gma11g02531 957 ProSiteProfiles IQ motif profile. 723 750 IPR000048 GO:0005515
Gma11g02531 957 ProSiteProfiles Ankyrin repeat profile. 605 637 IPR002110 GO:0005515
Gma11g02531 957 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 3 953 - -
Gma11g02531 957 SMART CG_1_2 11 129 IPR005559 GO:0003677
Gma11g02531 957 Gene3D Immunoglobulins 372 467 IPR013783 -
Gma11g02531 957 ProSiteProfiles CG-1 DNA-binding domain profile. 8 134 IPR005559 GO:0003677
Gma11g02531 957 ProSiteProfiles Ankyrin repeat region circular profile. 605 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02531 Gma-Chr11 40418547 40428911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02531 4 925 CAMTA Transcription Factor Family AT1G67310 47.629 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02531 K21596 - gmx:100787909 1783.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00049 18 411440 419885 Gma11g02531 11 40418547 40428911 GST
Gma11g02531 11 40418547 40428911 Gma05g01493 05 36807577 36818222 PCT
Gma11g02531 11 40418547 40428911 Gma08g00978 08 8253771 8265662 PCT
Gma05g01493 05 36807577 36818222 Gma11g02531 11 40418547 40428911 PCT
Gma08g00978 08 8253771 8265662 Gma11g02531 11 40418547 40428911 PCT