Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02499 ATGGCGGCTAGTAGACATGGAGGTTATCGTGACAACGAGTTTAGGGACCGTGAGTCCAATTTTGATGTTTCAAGGCGGGGTTTCAATAATAATTCTAAACAAGAGTATGATAAGATTACGAATGGTGGCCGCGATGTTGTGAGGGTTGGGAGCAAGGATGCAAGAGATAGGCTTAGTCTGAAACAAAAAGATATTAGGGACAGGGAAGCTCCAAATGGTAGTTACCGGTCATCTTCGAGTAAGAGCGACTCTGGCAGTAGTGGCGGGTGTAGTAGTGGGCTTGGTCCCAGAAGATGTGAGTTTTCTGTTAAGACTATGGATAGAGAGCCTGGTGAGCTTTCTAGTGAAAGTGGGTCTGATGATGATGGTATTGAATCAGGATCACAGGAAAAATACTGTGAGGTTGCAACAGGTGAAGGAAACCGTGCACGATCTCCACTAGAGAGGAAAAGAAAATTTTCTCCAATAGTATGGAATCAGGATGACAGCGAAGTCAATAATTTATCAAAACTTAGGGTTGTCACAGCAGTGACTACTCTGCCTCCACTTCCAATAGTCCGTCTGTCACCTAATGTTCCCGATAGAGGAGTTGAAACTCATCCTGTCAAAAACACAGAAGCTGAGATTCTTGAGTTACCAACTGTAACTAACCCTCCTTTGCTGTCTGAGTCTCCTGTAGGTTTGCATTCATTGTTGCCAGAGCAGAGATGGGGTAATGAGCAGGAAGCCAAGCAACCTGAAGGTGAAGATTTTATTCCAACTCATAATATATCATCTTCAAGATGGGCATCTGGTGATAACTCTCCTGGTGATGAAGGTGAAATCAATGATGACAAGGAAATCCTTAAGAGGAGGAAGCTATCTCCTGAGCTGGGTATGAGAGTAAGAAACAAGATGTTGAGACTAGAGGAATCTAACATAGAAGATTTTGTAGAAGCTAGAGCCAAATCATCTGAATCTGAAGAAAGAAGTAGCCGTGGGAGATCATCCAGTGGAGATTATCATCCTGGTAATTTGTCAGGGAAGGATGATTATATGGAGATTGATGGTCAAGGTAGCAGAAGTGAAACTAGTGGTTATCATTCGGATACAGATTTGGAAGATGATTGCAGAGAAACTTCTGAACCTCCGGTTCCACCACAAAGAGTTGTCAACATGCTTCAGGGTtgtagaagtgttgatgagtttgagagactgaacaagatagatgaaggaacatatggtgttgtatttagggcaaaagataagaagactggtgaaattgtggcattgaaaaaggtgaagatggagaaggaaaaagaaggttttccattgacttctctcagggaaataaacattcttctttcctttcaccacccatccatagttgatgttaaagaagttgtggtagggagtaaccttgatagtattttcatggttatggaatacatggaacatgatcttaaaggactaatggagggaatgaagcagccctttagccagagtgaagtaaaatgcttaatgctccagcttttagaaggtgtgaagtatcttcatgacaactgggtgcttcatagggatttgaagacttctaacctgcttctgaataataggggcgagttaaaaatttgtgattttggattggctcgtcagtatgggagcccattgaaaccatatacccaccttgtggttactctttggtacagggctcctgaacttcttctggggacaaaacaatattcaacagccattgacatgtggtctctgggttgtataatggctgagctattgtccaaggaacctctatttaatgggaagactgaatttgaacaacttgacaagattttcagaattcttggcacaccaaatgaaacaatttggcctgggttctcagaattaccccaagtcaaggtcaattttgtcaagaataaGCTTCCAACTCTGGGTGGTTCTGgtgtaatctcctgcgtaaaaaatttcctgcaacatcattcactggatcaccagttctttctgattctggatttgatttgttga 2016 0.2564 MAASRHGGYRDNEFRDRESNFDVSRRGFNNNSKQEYDKITNGGRDVVRVGSKDARDRLSLKQKDIRDREAPNGSYRSSSSKSDSGSSGGCSSGLGPRRCEFSVKTMDREPGELSSESGSDDDGIESGSQEKYCEVATGEGNRARSPLERKRKFSPIVWNQDDSEVNNLSKLRVVTAVTTLPPLPIVRLSPNVPDRGVETHPVKNTEAEILELPTVTNPPLLSESPVGLHSLLPEQRWGNEQEAKQPEGEDFIPTHNISSSRWASGDNSPGDEGEINDDKEILKRRKLSPELGMRVRNKMLRLEESNIEDFVEARAKSSESEERSSRGRSSSGDYHPGNLSGKDDYMEIDGQGSRSETSGYHSDTDLEDDCRETSEPPVPPQRVVNMLQGCRSVDEFERLNKIDEGTYGVVFRAKDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKGLMEGMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFEQLDKIFRILGTPNETIWPGFSELPQVKVNFVKNKLPTLGGSGVISCVKNFLQHHSLDHQFFLILDLIC 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02499 671 Gene3D Phosphorylase Kinase; domain 1 381 478 - -
Gma11g02499 671 CDD STKc_CDC2L1 390 635 IPR045267 GO:0004674|GO:0005524|GO:0006468
Gma11g02499 671 Pfam Protein kinase domain 396 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02499 671 Gene3D Transferase(Phosphotransferase) domain 1 479 663 - -
Gma11g02499 671 SMART serkin_6 396 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02499 671 MobiDBLite consensus disorder prediction 38 71 - -
Gma11g02499 671 PANTHER CELL DIVISION PROTEIN KINASE 119 641 - -
Gma11g02499 671 MobiDBLite consensus disorder prediction 101 115 - -
Gma11g02499 671 MobiDBLite consensus disorder prediction 1 131 - -
Gma11g02499 671 MobiDBLite consensus disorder prediction 312 329 - -
Gma11g02499 671 MobiDBLite consensus disorder prediction 72 91 - -
Gma11g02499 671 PANTHER - 119 641 - -
Gma11g02499 671 ProSiteProfiles Protein kinase domain profile. 396 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02499 671 SUPERFAMILY Protein kinase-like (PK-like) 388 634 IPR011009 -
Gma11g02499 671 MobiDBLite consensus disorder prediction 238 281 - -
Gma11g02499 671 MobiDBLite consensus disorder prediction 360 375 - -
Gma11g02499 671 MobiDBLite consensus disorder prediction 8 23 - -
Gma11g02499 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 516 528 IPR008271 GO:0004672|GO:0006468
Gma11g02499 671 MobiDBLite consensus disorder prediction 252 266 - -
Gma11g02499 671 MobiDBLite consensus disorder prediction 312 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02499 Gma-Chr11 40192650 40196160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02499 387 627 Core Cell Cycle Gene Families AT5G10270 51.953 2.34e-84 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Gma11g02499 Pkinase 2.5e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02499 K08818 - gmx:100793729 1210.67