Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02487 ATGTATTTATCGGAGAAGCCTCGTCCCATCGATTTCTACAAGGAGGAAGGCGCGCGCGACATGATGATCGAGGTCGTCTCCAACGGCGACCTCCCTCCTCCGCCGCCGCCGCCGCCGATGATTCTCGGCGAGAGCAGCGGCGAGGACCCCGAGGTCGAGATCAAGGCCCCGAAGAAGCGCGCCGAGACCTGGGTCCAGGACGAGACGCGCTCTCTCATTGGCCTTCGCCGCGAGATGGACGCGCTCTTCAACACCTCCAAGTCCAACAAGCACCTGTGGGAGCAGATATCGGCGAAGATGAGGGAGAAAGGTTTCGATCGTTCTCCAACCATGTGCACCGATAAGTGGCGCAACCTCTTGAAGGAGTTCAAGAAGGCCAAGCACCAGGACCGAGGGAGTGGTTCCGCCAAGATGTCGTATTACAAGGAGATTGACGAGATCCTCAGAGAGAGGAGCAAGAATGTGCAGTATAAAAGCCCTACTCCTCCGCCCAAGGTTGATTCCTTTATGCAGTTTGCTGATAAAGGTATTGACGATACCAGTATCTCTTTTGGGCCTGTTGAAGGTGGAGAAAGTCAGTCATGTTGTGGAAGGGTTATATCAGTTAAATGGGGTGATTATACAAGGCGAATAGGTATTGATGGCACCCCAGAAGCCATTAAAGAAGCAATTAGGGCTGCTTTTAGGTTGAGAACTAAACGTACATTTTGGTTGGAGGATGAAGATCAGATTATCAGAAGTATTGACCGTGAAATGCCTTTAGGAAATTACACTCTTCACATTGATGAAGGAATGGCCATTAAATTACCTCTCTATGATGAGCCTGACCATATACCTGTGCATACTGAAGATAAGATATTTTACACTGAAGACGATTTCCGTGATTTTCTGACCCGCCGGGGTTGGATATGTCTAAGAGAATTTGACAGCTACAGAAATATTGACAACATGGATGATCTTCGACCTGGTGCCATATATCGTGGTGTGAGTTGA 993 0.4924 MYLSEKPRPIDFYKEEGARDMMIEVVSNGDLPPPPPPPPMILGESSGEDPEVEIKAPKKRAETWVQDETRSLIGLRREMDALFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSAKMSYYKEIDEILRERSKNVQYKSPTPPPKVDSFMQFADKGIDDTSISFGPVEGGESQSCCGRVISVKWGDYTRRIGIDGTPEAIKEAIRAAFRLRTKRTFWLEDEDQIIRSIDREMPLGNYTLHIDEGMAIKLPLYDEPDHIPVHTEDKIFYTEDDFRDFLTRRGWICLREFDSYRNIDNMDDLRPGAIYRGVS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02487 330 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 5 191 - -
Gma11g02487 330 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 194 329 - -
Gma11g02487 330 CDD GT1 62 127 - -
Gma11g02487 330 Pfam Myb/SANT-like DNA-binding domain 63 147 IPR044822 -
Gma11g02487 330 MobiDBLite consensus disorder prediction 29 43 - -
Gma11g02487 330 Gene3D - 64 126 - -
Gma11g02487 330 PANTHER - 194 329 - -
Gma11g02487 330 PANTHER - 5 191 - -
Gma11g02487 330 MobiDBLite consensus disorder prediction 26 59 - -
Gma11g02487 330 SMART sant 60 122 IPR001005 -
Gma11g02487 330 ProSiteProfiles Myb-like domain profile. 56 120 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02487 Gma-Chr11 40106512 40112528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02487 20 329 Trihelix Transcription Factor Family AT3G25990 61.983 7.89e-148 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma11g02487 Myb_DNA-bind_4 2.8e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02487 - - gmx:100809497 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00093 18 730311 734604 Gma11g02487 11 40106512 40112528 GST