Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02473 ATGATCAAGAAGAAAAAGGGAGCAATAGTGAACATTGGCTCTGGTTCCACTGTTGTGCTTCCTTCATATCCTCTAGTCACACTCTATGCTGCTACAAAAGCATACCTTGCAATGTTCTCGAGATGCATCAGTTTAAAATACCAGCATCAAGGAATTGACATCCAGTGTCAGGTTCCATTATTTGTATCAACAAAGATGACCAAAATGAAGACATCGCTTTTTGTACCAACGCCGGATATGCATAGTAAAACATGCACAAGATAG 264 0.3977 MIKKKKGAIVNIGSGSTVVLPSYPLVTLYAATKAYLAMFSRCISLKYQHQGIDIQCQVPLFVSTKMTKMKTSLFVPTPDMHSKTCTR 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02473 87 PRINTS Glucose/ribitol dehydrogenase family signature 29 48 IPR002347 -
Gma11g02473 87 PRINTS Glucose/ribitol dehydrogenase family signature 50 67 IPR002347 -
Gma11g02473 87 PRINTS Glucose/ribitol dehydrogenase family signature 1 14 IPR002347 -
Gma11g02473 87 PANTHER RH59310P 1 87 - -
Gma11g02473 87 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 16 44 IPR020904 GO:0016491
Gma11g02473 87 Gene3D - 1 85 - -
Gma11g02473 87 Pfam short chain dehydrogenase 1 70 IPR002347 -
Gma11g02473 87 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 74 IPR036291 -
Gma11g02473 87 PANTHER ENOYL-(ACYL CARRIER) REDUCTASE 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02473 Gma-Chr11 39998116 39999679 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02473 1 87 Lipid Metabolism Gene Families AT1G67730 47.727 1.28e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02473 K10251 - gmx:100816067 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00104 18 822282 837170 Gma11g02473 11 39998116 39999679 GST
Gma05g01674 05 38466294 38469814 Gma11g02473 11 39998116 39999679 PCT
Gma08g01162 08 9890234 9893826 Gma11g02473 11 39998116 39999679 PCT