Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02469 ATGGCAGCTCTGTTACCTTGCGCGCCGAACATAGTCTATGGTCCGTTGTTGGGGAACCGGAGCACGAGCCACCTCCCGCACCGACCTCACTCCCATGCTTTCTCCGGTTCGACCACCAGACACTTTCTTCGCGGTTCGCTTACCGTCGCCCGGTTCGGATTCAAACCCGATTTCTTGCCCGAGCCGGATGAAGCTGAAGGCGTTCTCAGAGAACTGTTCGGCCGAGCGGAGGGACTTCTTTACACGATTGCCGATGCCGCCGTTTCTTCGTCTTCTTCTTCTTCTTCCGATACGGTTGCGGCTTCCTATGCCGCCAAACAGAGCAACGATTGGCTTTCCGGAATTGCCAATTACATGGAGACGGTTCTCAAGGTACTCAAGGACGGGCTTTCTGCTTTGCATGTCCCGTATGCTTATGGTTTTGCAATTATACTGCTCACGGTTCTTGTAAAAGCTGCCACTTTTCCATTAACCAAAAAACAGGTAGAATCTTCCTTAGCTATGCGAACTTTGCAACCACAAGTAAAGGCCATCCAGCAGCGTTATGCTGGTGATCAGGAGAGAATTCAACTCGAAACTGCTCGGTTGTATAAACTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCTACACTCGCAACAATACCAGTGTGGATTGGGCTATATCGAGCCCTTTCAAGTGTGGCAGATGAGGGGCTCCTTACTGAAGGCTTCTTCTGGATACCTTCCCTTGCTGGTCCAACTACAGTTGCAGCTCGTCAGAATGGCAGTGGTATCTCTTGGCTTTTTCCTTTCGTGGATGGTCACCCTCCCCTCGGATGGTCAGATACATTGGCTTACCTGGTCTTGCCTGTGTTGCTGGTCGTCTCTCAGTACATCTCTGTCCAAATAATGCAGTCATCACAGCCTAATGATCCCAACATGAAAAGTTCTCAAGCCTTGACCAATTTCCTTCCATTAATGATTGGTTACTTTGCTCTCTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTAACAAATAATATATTGAGCACTGCACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCTAAAAATCCTGTGAGGCAAGTCCCAGATGATATCATGAAGAATGACCTAACACAGGTTCAGAAGTCAATGTCTAAACTAAATTCCACAACAGCGGAAGAAGCCAGACTAAGTGAGAAAACATCAGAGGGGCCACAACCTGGTGAAAGATTTAAGCTAATAaaagagcaagaggcaagaagaaaacaacaaagagaagaagaagaagaaaaaaggaaagCCTTGGAAGCAGCAGCTAGAGAAACTAAAGTAGACAAGACACTTGAGGAAACAGTTGAAGTGGAGAATCAAACTGGAGGTGATTTAGTTGTTGAAAAATCTCGGTCTTTGGCTTCAGATACTGATCCCTCCATATCTGGAGTAGTAAATGGTAATCCATTAAGTAAAGACTTGGAGGGAAATCAGAATTCTACATCTACATCTGAGACAGAAAATAATGAAGGTTCTGCTCATTTCAACAATGTTGAGATAAACGAGAAAATTTTAGACAAGGAACCAAGAGAAGTATTAACAACTACAACCACCACAAACAAACAACCTCCTGCGGAAGAGACAAAGGATTGA 1632 0.4424 MAALLPCAPNIVYGPLLGNRSTSHLPHRPHSHAFSGSTTRHFLRGSLTVARFGFKPDFLPEPDEAEGVLRELFGRAEGLLYTIADAAVSSSSSSSSDTVAASYAAKQSNDWLSGIANYMETVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESSLAMRTLQPQVKAIQQRYAGDQERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSSVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQPNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVRQVPDDIMKNDLTQVQKSMSKLNSTTAEEARLSEKTSEGPQPGERFKLIKEQEARRKQQREEEEEKRKALEAAARETKVDKTLEETVEVENQTGGDLVVEKSRSLASDTDPSISGVVNGNPLSKDLEGNQNSTSTSETENNEGSAHFNNVEINEKILDKEPREVLTTTTTTNKQPPAEETKD 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02469 543 MobiDBLite consensus disorder prediction 466 509 - -
Gma11g02469 543 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 139 353 IPR028055 -
Gma11g02469 543 MobiDBLite consensus disorder prediction 392 448 - -
Gma11g02469 543 MobiDBLite consensus disorder prediction 380 543 - -
Gma11g02469 543 Pfam 60Kd inner membrane protein 139 353 IPR001708 GO:0016021|GO:0032977
Gma11g02469 543 PANTHER OXA1 30 477 IPR001708 GO:0016021|GO:0032977
Gma11g02469 543 PANTHER BNAA09G28180D PROTEIN 30 477 - -
Gma11g02469 543 Coils Coil 409 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02469 Gma-Chr11 39976767 39982902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02469 18 421 Chloroplast and Mitochondria Gene Families AT2G28800 51.358 2.44e-130 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02469 K03217 - gmx:100815190 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00108 18 851713 856018 Gma11g02469 11 39976767 39982902 GST