LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma11g02469	ATGGCAGCTCTGTTACCTTGCGCGCCGAACATAGTCTATGGTCCGTTGTTGGGGAACCGGAGCACGAGCCACCTCCCGCACCGACCTCACTCCCATGCTTTCTCCGGTTCGACCACCAGACACTTTCTTCGCGGTTCGCTTACCGTCGCCCGGTTCGGATTCAAACCCGATTTCTTGCCCGAGCCGGATGAAGCTGAAGGCGTTCTCAGAGAACTGTTCGGCCGAGCGGAGGGACTTCTTTACACGATTGCCGATGCCGCCGTTTCTTCGTCTTCTTCTTCTTCTTCCGATACGGTTGCGGCTTCCTATGCCGCCAAACAGAGCAACGATTGGCTTTCCGGAATTGCCAATTACATGGAGACGGTTCTCAAGGTACTCAAGGACGGGCTTTCTGCTTTGCATGTCCCGTATGCTTATGGTTTTGCAATTATACTGCTCACGGTTCTTGTAAAAGCTGCCACTTTTCCATTAACCAAAAAACAGGTAGAATCTTCCTTAGCTATGCGAACTTTGCAACCACAAGTAAAGGCCATCCAGCAGCGTTATGCTGGTGATCAGGAGAGAATTCAACTCGAAACTGCTCGGTTGTATAAACTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCTACACTCGCAACAATACCAGTGTGGATTGGGCTATATCGAGCCCTTTCAAGTGTGGCAGATGAGGGGCTCCTTACTGAAGGCTTCTTCTGGATACCTTCCCTTGCTGGTCCAACTACAGTTGCAGCTCGTCAGAATGGCAGTGGTATCTCTTGGCTTTTTCCTTTCGTGGATGGTCACCCTCCCCTCGGATGGTCAGATACATTGGCTTACCTGGTCTTGCCTGTGTTGCTGGTCGTCTCTCAGTACATCTCTGTCCAAATAATGCAGTCATCACAGCCTAATGATCCCAACATGAAAAGTTCTCAAGCCTTGACCAATTTCCTTCCATTAATGATTGGTTACTTTGCTCTCTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTAACAAATAATATATTGAGCACTGCACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCTAAAAATCCTGTGAGGCAAGTCCCAGATGATATCATGAAGAATGACCTAACACAGGTTCAGAAGTCAATGTCTAAACTAAATTCCACAACAGCGGAAGAAGCCAGACTAAGTGAGAAAACATCAGAGGGGCCACAACCTGGTGAAAGATTTAAGCTAATAaaagagcaagaggcaagaagaaaacaacaaagagaagaagaagaagaaaaaaggaaagCCTTGGAAGCAGCAGCTAGAGAAACTAAAGTAGACAAGACACTTGAGGAAACAGTTGAAGTGGAGAATCAAACTGGAGGTGATTTAGTTGTTGAAAAATCTCGGTCTTTGGCTTCAGATACTGATCCCTCCATATCTGGAGTAGTAAATGGTAATCCATTAAGTAAAGACTTGGAGGGAAATCAGAATTCTACATCTACATCTGAGACAGAAAATAATGAAGGTTCTGCTCATTTCAACAATGTTGAGATAAACGAGAAAATTTTAGACAAGGAACCAAGAGAAGTATTAACAACTACAACCACCACAAACAAACAACCTCCTGCGGAAGAGACAAAGGATTGA	1632	0.4424	MAALLPCAPNIVYGPLLGNRSTSHLPHRPHSHAFSGSTTRHFLRGSLTVARFGFKPDFLPEPDEAEGVLRELFGRAEGLLYTIADAAVSSSSSSSSDTVAASYAAKQSNDWLSGIANYMETVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESSLAMRTLQPQVKAIQQRYAGDQERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSSVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQPNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVRQVPDDIMKNDLTQVQKSMSKLNSTTAEEARLSEKTSEGPQPGERFKLIKEQEARRKQQREEEEEKRKALEAAARETKVDKTLEETVEVENQTGGDLVVEKSRSLASDTDPSISGVVNGNPLSKDLEGNQNSTSTSETENNEGSAHFNNVEINEKILDKEPREVLTTTTTTNKQPPAEETKD	543

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma11g02469	543	MobiDBLite	consensus disorder prediction	466	509	-	-
Gma11g02469	543	TIGRFAM	yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family	139	353	IPR028055	-
Gma11g02469	543	MobiDBLite	consensus disorder prediction	392	448	-	-
Gma11g02469	543	MobiDBLite	consensus disorder prediction	380	543	-	-
Gma11g02469	543	Pfam	60Kd inner membrane protein	139	353	IPR001708	GO:0016021\|GO:0032977
Gma11g02469	543	PANTHER	OXA1	30	477	IPR001708	GO:0016021\|GO:0032977
Gma11g02469	543	PANTHER	BNAA09G28180D PROTEIN	30	477	-	-
Gma11g02469	543	Coils	Coil	409	441	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma11g02469	Gma-Chr11	39976767	39982902	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma11g02469	18	421	Chloroplast and Mitochondria Gene Families	AT2G28800	51.358	2.44e-130	385

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma11g02469	K03217		-	gmx:100815190	992.645

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma18g00108	18	851713	856018	Gma11g02469	11	39976767	39982902	GST

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