Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02443 ATGGAGGTGACCCAATATACGTTCCTGGTGGTCCTAGTGTGGAGTTCATTATGTACAAATGCACAGTGGAATAACCCAATAAACTACTCTCCCTTCGACGAGATAAACAAAGGTGAAAACTCGAAGGTGACATGGAGTGTGTCGCTGTCATGTGTCTTCATTAGCATCCTCGTGTTTGTGTTGTTTAAGCTACGCGCGTGTTGTTGTTCTTCTTCCGGACGCCGTAACACTACAAAGCTCGTGGCAGCAGCCACAGAAACGATTGAAAAGTGCCCTGTTTTTGAATACTCGACGGCGAAGGAGCTTAAAGTGGGGAATGGGACAGAGGAGTGCGCGGTGTGCTTGGTCGAGTTCGAAGACTCTGACACCATTAAGATGCTCCCAAAATGCCAACACGTTTTCCACCAGCATTGCATCGATACATGGTTACCCTCTCGCATGACCTGTCCCATTTGTCGCCAGAAACTCACGTCTGAGGATAATACCGTAATCGACGTTGTTGATGTCGTCGTCCCAACGGAACAACAAGAACATGATGATACAGAGTCTACAGAGTCGGAGGTGGCAGTAACAGCAGCAGAAGAACAACCTCAACCTGATGAAACTGCAGAACATGAAACCGACACTGATCACAGTACTGTTGTGGAACAGGTGGTTGAATTTGAGGTTGTTGCCTGA 678 0.4749 MEVTQYTFLVVLVWSSLCTNAQWNNPINYSPFDEINKGENSKVTWSVSLSCVFISILVFVLFKLRACCCSSSGRRNTTKLVAAATETIEKCPVFEYSTAKELKVGNGTEECAVCLVEFEDSDTIKMLPKCQHVFHQHCIDTWLPSRMTCPICRQKLTSEDNTVIDVVDVVVPTEQQEHDDTESTESEVAVTAAEEQPQPDETAEHETDTDHSTVVEQVVEFEVVA 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02443 225 PANTHER RING FINGER DOMAIN-CONTAINING 9 203 - -
Gma11g02443 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 159 IPR013083 -
Gma11g02443 225 MobiDBLite consensus disorder prediction 174 212 - -
Gma11g02443 225 SMART ring_2 111 152 IPR001841 -
Gma11g02443 225 MobiDBLite consensus disorder prediction 198 212 - -
Gma11g02443 225 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Gma11g02443 225 SUPERFAMILY RING/U-box 110 159 - -
Gma11g02443 225 CDD RING-H2_EL5_like 110 153 - -
Gma11g02443 225 Pfam Ring finger domain 110 153 IPR001841 -
Gma11g02443 225 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL6 9 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02443 Gma-Chr11 39781941 39782618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02443 3 159 Rapid Response to Elicitors AT3G05200 33.735 2.00e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02443 K10664 - gmx:100804862 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00130 18 1014811 1015446 Gma11g02443 11 39781941 39782618 GST