Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02438 ATGAAGAGACTTAACAGCTCAGATTCTTCCACTGCCCTCATGACAATTTTTCCATCATCATCAACAGAGGAACATAGTCCGAGGAACAGCCACCACATGTATGGCAGGGAGTTCCGATCGATGTTGGACGGACTCGACGAGGAAGGGTGTGTTGAAGAACCGGGGCATCAATCTGAGAAGAAGCGTCGACTAAGTGTGGAACAAGTGAAGGCTTTGGAGAAGAACTTTGAGGTTGAAAACAAGCTTGAACCTGAGAGGAAGGTCAAGCTTGCCCAAGAACTTGGGTTGCAACCTAGACAAGTAGCCGTTTGGTTCCAAAACCGCCGAGCCAGATGGAAAACCAAACAATTGGAGAGAGATTATGGTGTCCTCAAAGCCAATTATGATGCTCTTAAGCTTAACTTTGGCACCCTCAATCAGGACAACGAAGCCTTACGAAAGCAGATAAAGGAATTGAAATCGAGGCTGCTGCAAGAAGAGAACACAGCAGGAAGCGGTGTTTCGGTGAAGGAAGAAGAGATAACAACGATGCCTGCAGACTCAGAAGAGAAAACGATGGAACAAAGTAAGAGTGACCCACCTTCTGAAACCTCGAACATTAATCCTAGTTCGGAGTCGTCGGAGGAGGACCACTTGAATTACGAATGTTTCAACAACAACAGCGACGACTGTGTCGTCGGAGGATCCGCCGCAGCATCGCTCTTGCAAGTGGACTTCATGAAAGACGGTTCTTCCGACAGCGACGGATCAAGCGCGATCTTGAACGAAGACACCATGTACTTGCCGTCTTCGATGAACTGTTTTCAGTTCCAGAAACCGTATCATCACGCGCAGTACGTGAAGACGGAGGAGCACAATTTCTTGAGCGCCGATGAGGCCTGCAATTTCTTCTCCGATGAACAAGCACCGACCCTGCAATGGTACTGTCCAGAACAGTGGAGCTGA 945 0.4836 MKRLNSSDSSTALMTIFPSSSTEEHSPRNSHHMYGREFRSMLDGLDEEGCVEEPGHQSEKKRRLSVEQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNFGTLNQDNEALRKQIKELKSRLLQEENTAGSGVSVKEEEITTMPADSEEKTMEQSKSDPPSETSNINPSSESSEEDHLNYECFNNNSDDCVVGGSAAASLLQVDFMKDGSSDSDGSSAILNEDTMYLPSSMNCFQFQKPYHHAQYVKTEEHNFLSADEACNFFSDEQAPTLQWYCPEQWS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02438 314 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 263 306 IPR045224 GO:0003700
Gma11g02438 314 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 258 IPR045224 GO:0003700
Gma11g02438 314 PRINTS Lambda-repressor HTH signature 86 95 IPR000047 GO:0003677
Gma11g02438 314 PRINTS Lambda-repressor HTH signature 95 111 IPR000047 GO:0003677
Gma11g02438 314 SMART HOX_1 58 119 IPR001356 GO:0003677
Gma11g02438 314 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6-LIKE 1 258 - -
Gma11g02438 314 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6-LIKE 263 306 - -
Gma11g02438 314 Pfam Homeobox associated leucine zipper 115 156 IPR003106 GO:0006355|GO:0043565
Gma11g02438 314 MobiDBLite consensus disorder prediction 160 211 - -
Gma11g02438 314 CDD homeodomain 60 116 IPR001356 GO:0003677
Gma11g02438 314 SUPERFAMILY Homeodomain-like 40 117 IPR009057 -
Gma11g02438 314 Pfam Homeodomain 60 113 IPR001356 GO:0003677
Gma11g02438 314 Gene3D - 16 116 - -
Gma11g02438 314 MobiDBLite consensus disorder prediction 1 24 - -
Gma11g02438 314 ProSiteProfiles 'Homeobox' domain profile. 55 115 IPR001356 GO:0003677
Gma11g02438 314 ProSitePatterns 'Homeobox' domain signature. 90 113 IPR017970 GO:0000981|GO:0006355
Gma11g02438 314 MobiDBLite consensus disorder prediction 191 207 - -
Gma11g02438 314 MobiDBLite consensus disorder prediction 1 31 - -
Gma11g02438 314 Coils Coil 114 162 - -
Gma11g02438 314 MobiDBLite consensus disorder prediction 175 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02438 Gma-Chr11 39729730 39732360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02438 1 308 Homeobox Transcription Factor Family AT2G22430 49.699 1.21e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma11g02438 Homeodomain 2.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02438 K09338 - gmx:100781155 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00137 18 1067762 1070457 Gma11g02438 11 39729730 39732360 GST
Gma05g01741 05 39037549 39039873 Gma11g02438 11 39729730 39732360 PCT
Gma08g01227 08 10410795 10412122 Gma11g02438 11 39729730 39732360 PCT