Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02426 ATGGCCATTGCACCTTTTGGTAATACATCAGCTACTCAATGGGGGATTCATCCTCAGATTTTCGCAGGGTCAACTGGGTTGGGAAAGATTGCATCATCCAGGAACAATGCTACAAGCAGGATAAGGTTTATGGCTGCCCCATGTTCGAGCTTTTTTTCTCGAGATTCCTTGCATGCACTATTTGACAAAGGTTCATCACAAACTTTGCATCGTCGCAGGGGATCGAGGTTGATAGTTAGAGCAGATGCAGATTACTATTCTGTCCTCGGGGTGTCAAGAAATTCCAGTAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGGAGTTGTCATCCTGATGTGAACAAAGAACCTGGTGCAGAACAGAAATTTAAAGAACTTAGTAATGCATATGAGGTCTTGTCAGATGATGAGAAACGATCCATATATGATACATATGGAGAGGCTGGACTTAAGGGTTCAGGAATGGGCATGGGGGATTTCAGCAATCCTTTTGACCTATTTGAGACACTGTTTGAGGGCATGGGGGGCATGGGGGGAAGCAGAGGATCTTGGAATGGAGCAGTTGAGGGTGAAGATGAGTATTACAGTCTTGTTTTGAACTTCAAAGAAGCCGTTTTTGGGGTGGAAAAGGAGATAGAGATTCGGCGATTAGAGAGCTGTGGAACTTGCAATGGTTCGGgggctaaaccaggaactaaatcatccaagtgtagcacttgtggtggtcagggtcgggttgtcacatcgacaaggactccattaggcatctttcagcagtctatgacatgctcttcttgcaatggaactggagaaacttcaacaccttgcagcacatgttctggggaaggtcgagtgagaaagacaaagcggaTCAGTCTCAAGGTACCAGCTGGTGTGGATTCTGGCAGTCGTTTAAGGGTCCGAAATGAAGGTAATGCTGGAAGGCGTGGGGGTTCTCCTGGTGACCTCTTTGTCATTCTTGAAGTTATCCCTGACCCCGTGCTTAAGCGAGATGACACAAACATTTTATACACATGTAAGGTGTCTTATATTGATGCAATCTTGGGGACAACAATTAAGGTTCCTACTGTGGATGGCATGGTGGATTTAAAAATCCCAGCTGGGACTCAACCAAGCTCGACACTTGTTATGGCTAAGAAAGGTGTTCCCCTGCTGAATAAAAAGAATATGAGGGGTGATCAATTGGTTCGGGTGCAAGTCGAAATCCCCAAAAAACTGAGCAAAGAAGAGAGAAAACTTGTTGAGGAACTAGCTGATTTAAGCAAAGGCAAGACTGCTGCCACCAGTAGGAGATAA 1323 0.3825 MAIAPFGNTSATQWGIHPQIFAGSTGLGKIASSRNNATSRIRFMAAPCSSFFSRDSLHALFDKGSSQTLHRRRGSRLIVRADADYYSVLGVSRNSSKSEIKSAYRKLARSCHPDVNKEPGAEQKFKELSNAYEVLSDDEKRSIYDTYGEAGLKGSGMGMGDFSNPFDLFETLFEGMGGMGGSRGSWNGAVEGEDEYYSLVLNFKEAVFGVEKEIEIRRLESCGTCNGSGAKPGTKSSKCSTCGGQGRVVTSTRTPLGIFQQSMTCSSCNGTGETSTPCSTCSGEGRVRKTKRISLKVPAGVDSGSRLRVRNEGNAGRRGGSPGDLFVILEVIPDPVLKRDDTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPSSTLVMAKKGVPLLNKKNMRGDQLVRVQVEIPKKLSKEERKLVEELADLSKGKTAATSRR 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02426 440 Gene3D - 222 285 - -
Gma11g02426 440 ProSiteProfiles Zinc finger CR-type profile. 209 290 IPR001305 GO:0031072|GO:0051082
Gma11g02426 440 Pfam DnaJ central domain 222 285 IPR001305 GO:0031072|GO:0051082
Gma11g02426 440 Hamap Chaperone protein DnaJ [dnaJ]. 81 435 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Gma11g02426 440 PRINTS DnaJ domain signature 86 104 IPR001623 -
Gma11g02426 440 PRINTS DnaJ domain signature 104 119 IPR001623 -
Gma11g02426 440 PRINTS DnaJ domain signature 120 140 IPR001623 -
Gma11g02426 440 PRINTS DnaJ domain signature 140 159 IPR001623 -
Gma11g02426 440 CDD DnaJ 84 137 IPR001623 -
Gma11g02426 440 CDD DnaJ_C 193 415 - -
Gma11g02426 440 Gene3D - 332 440 - -
Gma11g02426 440 SUPERFAMILY HSP40/DnaJ peptide-binding domain 190 345 IPR008971 GO:0006457|GO:0051082
Gma11g02426 440 Gene3D - 192 327 - -
Gma11g02426 440 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 32 439 - -
Gma11g02426 440 SUPERFAMILY Chaperone J-domain 81 183 IPR036869 -
Gma11g02426 440 SMART dnaj_3 83 140 IPR001623 -
Gma11g02426 440 Pfam DnaJ C terminal domain 197 412 IPR002939 -
Gma11g02426 440 Gene3D DnaJ domain 81 184 IPR036869 -
Gma11g02426 440 CDD DnaJ_zf 222 285 IPR001305 GO:0031072|GO:0051082
Gma11g02426 440 PANTHER BNAA01G34580D PROTEIN 32 439 - -
Gma11g02426 440 ProSiteProfiles dnaJ domain profile. 84 148 IPR001623 -
Gma11g02426 440 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 209 289 IPR036410 -
Gma11g02426 440 TIGRFAM DnaJ_bact: chaperone protein DnaJ 84 428 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Gma11g02426 440 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Gma11g02426 440 SUPERFAMILY HSP40/DnaJ peptide-binding domain 337 423 IPR008971 GO:0006457|GO:0051082
Gma11g02426 440 Pfam DnaJ domain 84 145 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02426 Gma-Chr11 39625228 39629893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02426 85 147 C2H2 Transcription Factor Family AT1G74250 46.377 2.55e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02426 K03686 - gmx:100786143 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00148 18 1177926 1186780 Gma11g02426 11 39625228 39629893 GST