Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02425 ATGTGCTACTTGAGCATAATGCACGTTGTTGTTATGTCAGCGGTTGATGTCAGTGGAAAAATGGATTTGGCATCTGTTCTTTTGCTATTAACTAGCTTATGCTCTTCTTCTGCACTGGCTGAGCTTGATTCACAAGAAGATGCACTGTATGCATTGAAGGTATCATTGAATGCTTCTCCCAACCAGCTTACAAACTGGAACAAAAATCTAGTAAACCCTTGTACTTGGTCCAATGTTGAATGTGACCAGAATAGCAACGTTGTTCGAATTTCACTAGAATTTATGGGATTCACAGGATCATTGACACCAAGAATAGGATCTCTAAATAGTCTTACAATTCTTTCTTTGCAAGGGAATAACATCACTGGTGACATACCAAAAGAATTTGGAAATCTTACAAGCTTGGTCAGATTGGATTTGGAAAACAACAAATTAACTGGTGAAATACCATATTCACTTGGTAATCTTAAAAAGCTTCAATTCTTGACATTGAGTCAAAACAATCTCAATGGGACTATTCCAGAATCACTTGCCAGTCTCCCAAGCTTGATCAATGTTATGCTAGATTCAAATGATCTCAGCGGGCAGATTCCTGAGCAGTTATTCAGCATTCCTACGTACAATTTCACTGGAAATAATTTGAACTGTGGTGTGAATTATCTTCATCTTTGCACATCTGATAATGCATATCAAGGTTCGTCACATAAAACAAAAATAGGCCTCATAGTTGGAACAGTTACAGGTTTAGTTGTTATTCTTTTTCTTGGTGGCCTGCTGTTCTTCTGGTACAAGGGGTGCAAGAGTGAAGTTTATGTAGATGTTCCAGGTGAAGTCGATCGCCGAATTACATTTGGTCAAATAAAAAGATTTTCCTGGAAAGAACTACAGATAGCTACAGACAACTTCAGTGAGAAAAATATTTTAGGACAGGGAGGTTTTGGAAAGGTTTATAAAGGTATTCTAGCTGATGGCACCAAAGTTGCTGTCAAAAGGTTAACCGATTATGAAAGTCCTGCGGGTGATGCAGCTTTCCAGCGTGAAGTGGAGTTGATAAGCATAGCTGTCCATAGGAACCTGTTACGGCTCATTGGTTTTTGTACTACTTCAACTGAACGCCTCTTAGTTTATCCCTTCATGCAGAACTTAAGTGTTGCCTATCGTCTACGAGAACTCAAACGTGGGGAAGCCGTTTTAGATTGGCCTACCAGAAAACGAGTGGCTCTAGGAACAGCCCGTGGCCTAGAATATCTTCACGAGCAATGCAATCCTAGGATTATTCATAGGGATGTGAAGGCAGCTAATATATTACTTGATGGAGATTTTGAAGCAGTTGTTGGTGACTTTGGTTTAGCAAAATTAGTTGATATTCGACATACTAATGTGACAACTCAAGTTCGTGGGACAATGGGTCATATAGCTCCAGAATACTTGTCCACTGGAAAATCTTCAGAAAGGACAGATGTTTTTGGTTATGGGATTATGCTTTTGGAGCTCGTAACAGGTCAACGTGCAATTGACTTTTCACGTTTGGAAGAGGAAGATGACGTGTTATTGCTTGACCATGTTAAGAAACTGCAACGGGAGAAAAGACTAGAGACTATTGTTGACTGCAACCTTAATAAAAATTACAACATGGAAGAGGTTGAAATGATTGTACAAATTGCATTACTCTGCACACAAGCATCGCCTGAGGATCGTCCAGCAATGTCAGAGGTTGTAAGAATGTTAGAGGGAGAAGGGCTAGCTGAAAGATGGGAGGAATGGCAGCATGTGGAGGTCAATACAAGGCAAGATTATGAGAGACTGCAAAGAAGAATGAACTGGGGAGAAGATTCGGTTTATAACCAAGATGCAGTTGAGTTATCGGGTGGAAGATGA 1878 0.3999 MCYLSIMHVVVMSAVDVSGKMDLASVLLLLTSLCSSSALAELDSQEDALYALKVSLNASPNQLTNWNKNLVNPCTWSNVECDQNSNVVRISLEFMGFTGSLTPRIGSLNSLTILSLQGNNITGDIPKEFGNLTSLVRLDLENNKLTGEIPYSLGNLKKLQFLTLSQNNLNGTIPESLASLPSLINVMLDSNDLSGQIPEQLFSIPTYNFTGNNLNCGVNYLHLCTSDNAYQGSSHKTKIGLIVGTVTGLVVILFLGGLLFFWYKGCKSEVYVDVPGEVDRRITFGQIKRFSWKELQIATDNFSEKNILGQGGFGKVYKGILADGTKVAVKRLTDYESPAGDAAFQREVELISIAVHRNLLRLIGFCTTSTERLLVYPFMQNLSVAYRLRELKRGEAVLDWPTRKRVALGTARGLEYLHEQCNPRIIHRDVKAANILLDGDFEAVVGDFGLAKLVDIRHTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLQREKRLETIVDCNLNKNYNMEEVEMIVQIALLCTQASPEDRPAMSEVVRMLEGEGLAERWEEWQHVEVNTRQDYERLQRRMNWGEDSVYNQDAVELSGGR 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02425 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Gma11g02425 625 PANTHER LRR RECEPTOR-LIKE KINASE 21 625 - -
Gma11g02425 625 SMART serkin_6 302 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02425 625 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 21 625 - -
Gma11g02425 625 Pfam Leucine Rich Repeat 134 156 IPR001611 GO:0005515
Gma11g02425 625 SUPERFAMILY L domain-like 44 216 - -
Gma11g02425 625 ProSiteProfiles Protein kinase domain profile. 302 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02425 625 Gene3D Ribonuclease Inhibitor 42 225 IPR032675 -
Gma11g02425 625 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Gma11g02425 625 Pfam Leucine rich repeat N-terminal domain 43 82 IPR013210 -
Gma11g02425 625 Pfam Protein kinase domain 303 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02425 625 Gene3D Transferase(Phosphotransferase) domain 1 379 596 - -
Gma11g02425 625 SUPERFAMILY Protein kinase-like (PK-like) 281 577 IPR011009 -
Gma11g02425 625 Gene3D Phosphorylase Kinase; domain 1 271 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02425 Gma-Chr11 39610141 39618563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02425 20 625 Receptor kinase-like Gene Family AT5G10290 72.459 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gma11g02425 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02425 - - gmx:100786654 1140.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00149 18 1190519 1197464 Gma11g02425 11 39610141 39618563 GST
Gma11g02425 11 39610141 39618563 Gma05g01448 05 36298030 36305255 PCT
Gma11g02425 11 39610141 39618563 Gma08g00929 08 7830095 7835619 PCT